Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00444 ATGGCCCCGAACAAGCTCAATTCCTCGGGAAACACAAGTATGTCATGTTCACAGGCTGAGAATGGTTTTCTCAGTTCCTTTTCTCTCTTCCCTGAGAAAGCAGTGCAAGAACTTCTTCAATCTCCAATCCAGGGGTCGGATGACCATCTTATAGAGTTCTCCGAAGCTTTAAGAACCGTCGCGAAGGCTCTCAGGCGAGTCGCTGAAGGAAAAGCATCTGCTCAAGCTGAGGCTGCTGAATGGAAACGTAAATATGAGTTGGAAAGGGCACGGAATCTGCACTTTGAAAACAAAGAGAAATCATGCCTAGAGCATCAGCCTGATGTTGATGATCTGAGTACCAATAACCCCACCAAACCACCTATGTTATGTATTGAAGCTAATGGGAAGACTGAGAAATGTTGTTCAAGGAATGGTATTTGTTCCCATGAGGTTCTTAGGAATGGGAAAACTGATTCTGATTCCAAGATGATCAGAAAGGCTTCATTTAAACTTTCATGGTATTGCAAAGGTGAGAAAAATGATCAGTACAAACATGATATTGTCTCTTTTGAAAGAGGAAATATAACCACAGCAGAGCGCAGTAGTAAGCAGATCTCTCTGAAATGGGAGTCGTGCCCACAGACGGTGCTTATAATGACGAAACCAAATTCAGTTTCAGTTCAAATTCTGTGTGCTGAAATGATCAGATGGTTGAGGCGGCAAAAGAATCTACACATCTACGTGGAACCACGTGTCAGGGAGGAACTTTTGACGGATTCATCATACTTTAACTTTGTAGAAACTTGGAATGATGATAAGGAAGTTTTGATGCTGCACACTAAAGTTGACCTTGTGATAACCCTTGGTGGAGATGGCACTGTCCTTTGGGCAGCGTCTATGTTCAAAGGGCCAGTGCCTCCTATTGTCCCCTTTTCTTTAGGATCTCTTGGCTTTATGACCCCTTTCTGTATCCTTCAACTTTGTTTGCATGTATATTACTACTCAGGACTCGAGTATAAAAAAAAAAAACTCACGCTAATTAATAATGTTAATTAA 1038 0.4181 MAPNKLNSSGNTSMSCSQAENGFLSSFSLFPEKAVQELLQSPIQGSDDHLIEFSEALRTVAKALRRVAEGKASAQAEAAEWKRKYELERARNLHFENKEKSCLEHQPDVDDLSTNNPTKPPMLCIEANGKTEKCCSRNGICSHEVLRNGKTDSDSKMIRKASFKLSWYCKGEKNDQYKHDIVSFERGNITTAERSSKQISLKWESCPQTVLIMTKPNSVSVQILCAEMIRWLRRQKNLHIYVEPRVREELLTDSSYFNFVETWNDDKEVLMLHTKVDLVITLGGDGTVLWAASMFKGPVPPIVPFSLGSLGFMTPFCILQLCLHVYYYSGLEYKKKKLTLINNVN. 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00444 345 Coils Coil 71 91 - -
Seca6g00444 345 PANTHER NAD KINASE 54 317 - -
Seca6g00444 345 Gene3D - 179 324 IPR017438 -
Seca6g00444 345 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Seca6g00444 345 FunFam Probable NAD kinase 1 198 324 - -
Seca6g00444 345 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 209 318 IPR016064 -
Seca6g00444 345 Pfam ATP-NAD kinase N-terminal domain 210 318 IPR002504 GO:0003951|GO:0006741
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00444 Seca-Chr6 13409304 13417516 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00444 K00858 - gmx:100806276 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00444 6 13409304 13417516 Seca6g00444 6 13409304 13417516 ECH