Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00439 ATGTCAATAGCTTTCTCCTTCACTACCCCTCCCTCTTCCTCTTCCTATTCCTATTCTTATTCTTCTTCCAAATCCCTTCCTTCATTTTCATTCTCTTCACCCTCCCTTCGTCTCCGCCTCACTCCAACTCCCGCTCCCTTGTACCGCATCCAGCGCCGCACAGATCTCCCTTTCATTCTCCACTCCACCGGAGGCGGCGGCGGCGGGAGCGGATCTTTTGGCGGCGGTCATGGTGGCGGCGACGGCCACGGAGACGGCAATGACGGAAATAGCGGAAAGAACGAGGCGATTATGGTGTTGGCGGAGGCAGGGAGGTCGTTGGAGAGCGTTCCTGCTGACTTGGCGGCGGCGATAAAGGAAGGGAAGATCCCTGCTTCTGTGGTGTCTCGGTTTCTGGAATTGGAGAAGTCTCCTTTCTTCCGATGGTTGCTTCAGTTTACTGGATTCAAGGAGCGTCTTCTCGCCGATGATCTCTTCCTTGCCAAGGTCGCCATGGAGTGCGGTGTTGGCGTCTTCACCAAGGTTACTGCTGCTGAGTATGATCGCAGGAGAGAAAACTTTTTCAAGGAGCTGGAAATTGTGTTTGCTGATGTGGTCATGGCCATACTCGCAGATTTCATGCTGGTTTATCTTCCAGCACCTACTGTTTCTCTTAGACCACCACTTGCAATCGGTGCAGGGGCTATTGCTAAGTTTTTCCACAACTGCCCAGACAATGCATTCCAGGTTGCTCTCTCTGGAACATCATATTCCTTATTACAGAGGATTGGTGCAATTGTGCGTAATGGGACTAAGCTTTTTGCAGTTGGAACTGCTTCATCACTGGTCAGTACTCATCTTCCTTGGGATTTTTCTTGTGCCTTTCTGGTTTAG 873 0.5109 MSIAFSFTTPPSSSSYSYSYSSSKSLPSFSFSSPSLRLRLTPTPAPLYRIQRRTDLPFILHSTGGGGGGSGSFGGGHGGGDGHGDGNDGNSGKNEAIMVLAEAGRSLESVPADLAAAIKEGKIPASVVSRFLELEKSPFFRWLLQFTGFKERLLADDLFLAKVAMECGVGVFTKVTAAEYDRRRENFFKELEIVFADVVMAILADFMLVYLPAPTVSLRPPLAIGAGAIAKFFHNCPDNAFQVALSGTSYSLLQRIGAIVRNGTKLFAVGTASSLVSTHLPWDFSCAFLV. 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00439 290 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 22 278 - -
Seca6g00439 290 MobiDBLite consensus disorder prediction 69 93 - -
Seca6g00439 290 Pfam Protein RETICULATA-related 151 279 IPR021825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00439 Seca-Chr6 13377885 13382955 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00439 - - lja:Lj3g3v3612570.1 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00439 6 13377885 13382955 Seca6g00439 6 13377885 13382955 ECH