Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00437 ATGGCTTCTGTTCTTCTTCTGCCTGTACTCAAGCAATATCCTACTACTCTCCCATTTCTTTCCCCACCTGATCCCTTTCCACGATCCATCTCCCCCAAATCCACACTACTTCACTTCCTTCCCAATAACAACAAACCTTCACCAATCCAGTGCTCTTCCTCCTCCAATTCCATCTCAAGCCTAACCACCCCCGACCAGGAGGACGAATCTGAACAAGAAGAATTACAAGAAAAAGAAGAAGAGACCCTGAAATCACACCCTTCTTTGAGCGAAGTATGGAGAGAAATCCAAGGATGCAACGACTGGGAAGGTCTATTAGATCCCATGAACCCTCACCTCCGCAGAGAAATAATTCGCTACGGCGAACTCGCTCAAGCCTGCTACGACTCCTTCGACTTCGACCCACACTCCAAATACTGTGGAACCTGCAAATACCACCCATCAAACTTCTTCAACAACCTTAACATGACGAAAGACACCACAGGCTACACCATCACCCGCTACCTCTACGCAACCTCAAACATCAACCTCCCTAACTTCTTCCTCCACAATTCCAAGCTCAGCAACACCAGCGTGTGGAGCCCACACGCCAACTGGATGGGCTACGTGGCTGTAGCCACAGACGAGGAGCAAATCAAACGGTTAGGACGCCGTGACATAGTCATTGCATGGAGAGGAATCGTCACATACATCGAATGGATCTATGACCTCAAAGACATTCTCTGCTCAACTAACTTCACAACCGACTCAACAATCAAAGTCGAATCCGGTTTCTATGACTTATACACCAAGAAAGAAGATTCATCATCATCATCATCATGCAGTTATTCCTCTTTCTCAGCACGCGAACAAATCCTCTCTGAAGTGAAACGGCTTCTTCACTTTTACGAAAATGAAGAAATCAGCATCACAATCACAGGGCACAGCCTCGGTGCTGCCTTGGCTACACTAAGTGCGTACGACATCGCTGAATTGAAGCTAAACGACGTCGTTCACCCTGTCACGGTGTATTCCTTTGCAGGGCCCAGGGTTGGGAATTTGAAATTCAAGGAACGGTGTGAGGAACTTGGGGTGAAGGTGTTGAGAGTGATAAACGTTCACGATGTGGTACCAACTGTGCCTGGGATAATAACCAATGAGAAGTTTCAGTTTCAAAAGTATATAGAAGATGCTTTGTCTTTCCCGTGGAGCTATGCACATGTTGGGAAGGAAATTGCGTTGGACCATAGGAATAGTCCGTTTTTGAAGAAGGAGGCGAAGAGCAATGATCTGATGTGTGCGCATAATTTGGAGGTTCATCTGCACTTGATGGATGGGTACCATGGGAAGGGGAAGAGGTTTCGATTGGCGAGTAAGAGGGACATTGCGCTTGTGAATAAGAGTGGTGATTTTTTGAGGGGTGAGTATGGTGTGCCTCCGTATTGGAGGCAGGATGAGAATAAAGGGATGGTGAGAAGCAGAGATGGAAGGTGGGTTTTGCCGGATAGACAGAGAGTGGAGGCGCATCCACCAGATATGGTACACCATCTTCAGCAAGTGCTCAAGAACAATCACCATGGGAATAATCACCATTTAGGAACCAAGTAA 1587 0.4694 MASVLLLPVLKQYPTTLPFLSPPDPFPRSISPKSTLLHFLPNNNKPSPIQCSSSSNSISSLTTPDQEDESEQEELQEKEEETLKSHPSLSEVWREIQGCNDWEGLLDPMNPHLRREIIRYGELAQACYDSFDFDPHSKYCGTCKYHPSNFFNNLNMTKDTTGYTITRYLYATSNINLPNFFLHNSKLSNTSVWSPHANWMGYVAVATDEEQIKRLGRRDIVIAWRGIVTYIEWIYDLKDILCSTNFTTDSTIKVESGFYDLYTKKEDSSSSSSCSYSSFSAREQILSEVKRLLHFYENEEISITITGHSLGAALATLSAYDIAELKLNDVVHPVTVYSFAGPRVGNLKFKERCEELGVKVLRVINVHDVVPTVPGIITNEKFQFQKYIEDALSFPWSYAHVGKEIALDHRNSPFLKKEAKSNDLMCAHNLEVHLHLMDGYHGKGKRFRLASKRDIALVNKSGDFLRGEYGVPPYWRQDENKGMVRSRDGRWVLPDRQRVEAHPPDMVHHLQQVLKNNHHGNNHHLGTK. 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00437 528 MobiDBLite consensus disorder prediction 48 87 - -
Seca6g00437 528 FunFam Phospholipase A1-II 3 92 503 - -
Seca6g00437 528 Gene3D alpha/beta hydrolase 92 506 IPR029058 -
Seca6g00437 528 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 62 497 - -
Seca6g00437 528 Pfam Lipase (class 3) 221 376 IPR002921 GO:0006629
Seca6g00437 528 CDD Lipase_3 168 411 - -
Seca6g00437 528 MobiDBLite consensus disorder prediction 48 65 - -
Seca6g00437 528 SUPERFAMILY alpha/beta-Hydrolases 193 441 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00437 Seca-Chr6 13156188 13157774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00437 88 514 Acyl Lipid Metabolism Gene Families AT1G51440 72.789 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00437 - - gmx:100795661 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00437 6 13156188 13157774 Seca6g00437 6 13156188 13157774 ECH