Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00418 ATGGTGATTAGATTACTGTGTCTTTGGCTTTGCTGCAATTCTGGAACTCTACGGTGCAAGGTTTTCAGTTCTTCCTCCAGAGAAGTGAAGCATTTGAAATCTGCGAACAGCGATCATAAGCACAGAGCACTCCATCATCAGGCTGCAACTTTTGTTGTTGAGTCGAGTGTGCTTTGTCCTGGAAGGATGAATTTGTTAAAGGAGGTTCGCCGTTGCCTATCCAAGAATACTGGGCCCCGTGTTTCTTGGTTTGTTGATTCTCAGACAAATGTTGTTGCCAACCGCAACCCCTTGATTGTATCCCGGCGATTTGGAAGTGGCATTAACAATGGAAACGAAGTGGATCATCAATTGACTAGGGACTTCCTCGTGAAGCTTTGGGTTGCTGATAGGAAAATGAGAAGCCCCAGAGGAAAGCAAGGGAGGAAACTGGTCAAATATCGAGGTGATGGTGACCCCAGATGGTTTTCGGGTTCATCTGTTGCAGGACATGGTGGAGTCTTGAGGAAAGGTAAAAAAAGAGTCTTGAAGCAACCTCCTATCAGTCAATCTGTCTCTGAATTTTTAGAACCAGAATCTCCACAAGAGGCCAAGGTAGCACCTCTGCTTGCCAGGTCCAACTTACTAATTACCAGAGATATCGAGTGGGCAAATCTTGTATTTGGCTTTGAACAGGAAAATCGCTATGCCATTGTAGATGTGTGCTACCCCCAGTCGCCTGTAGGTTTTATTCGTGAACAGAGCAATGTCCTTACCAGACAGTTTCTTCGTCTAAGGCGGCCTTTTGTTGCATACATAACTGATGCTATGGGGAATGAGCTCTTTAGGGTTCGCAGACCCTTTTGGTGGATAACAAGTTCCATTTATGCGGAAATTGATGGTAAGGAAATTGGAGTAGTTCACAGGCGGTGGCATCTCTGGAGGAGAATCTATGATTTGTACCTGGGGAATAAGCAATTTGCGGTGGTTGAGAATCCTGGCTTATGGAATTGGACATTCACCTTGAAAGATATTAATGGTGAGGTGCTTGCTCAAATAGATCGTGACTGGAGGGGTTTTGGTTTTGAGATTTTGACTGATGCTGGTCAGTATGTGATTCGGTTTGGGAGTTCTGATCCCAGCTCCAAGATTGGCCTTGCCACTGCGATTCAGGACCTGGAAGTCATACGCCCACTGACCCTTGCAGAGAGAGCTGTAGCTGTAGCTCTTGCTATATCACTAGATAATGACTACTTCTCAAGACATGGAGGCTGGGGATTACCCTTCATTGCTGTCAGCGAGTAA 1284 0.4564 MVIRLLCLWLCCNSGTLRCKVFSSSSREVKHLKSANSDHKHRALHHQAATFVVESSVLCPGRMNLLKEVRRCLSKNTGPRVSWFVDSQTNVVANRNPLIVSRRFGSGINNGNEVDHQLTRDFLVKLWVADRKMRSPRGKQGRKLVKYRGDGDPRWFSGSSVAGHGGVLRKGKKRVLKQPPISQSVSEFLEPESPQEAKVAPLLARSNLLITRDIEWANLVFGFEQENRYAIVDVCYPQSPVGFIREQSNVLTRQFLRLRRPFVAYITDAMGNELFRVRRPFWWITSSIYAEIDGKEIGVVHRRWHLWRRIYDLYLGNKQFAVVENPGLWNWTFTLKDINGEVLAQIDRDWRGFGFEILTDAGQYVIRFGSSDPSSKIGLATAIQDLEVIRPLTLAERAVAVALAISLDNDYFSRHGGWGLPFIAVSE. 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00418 427 Pfam Scramblase 187 414 IPR005552 GO:0017121|GO:0017128
Seca6g00418 427 SUPERFAMILY Tubby C-terminal domain-like 265 368 IPR025659 -
Seca6g00418 427 PANTHER PHOSPHOLIPID SCRAMBLASE-RELATED 114 416 IPR005552 GO:0017121|GO:0017128
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00418 Seca-Chr6 11940131 11948304 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00418 - - gmx:100784576 553.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00418 6 11940131 11948304 Seca6g00418 6 11940131 11948304 ECH