Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00410 ATGATTGGCTACAAATGCTTTCGTAGGAATACAACATTCGCTCAGTCGTCTTCCCTTCATCCTCAAATCTTTTCTCTTCCCGCACCGATCCCTCAATGGCCTGAAGGACAAGGTTTCGCTTCGGGACTTGTAAATCTAGGTGAAATAGAAATTTTCAAGGTCACTAGGTTTGAGTTCATTTGGAGCTGCAGTGCAATACTAGACACTAAAAATGCTGTTACATTCTATAAACCTTGTGGAATACCTGATGGTTTCCATATTCTTGGTCACTATTGCCAACCCTGTGACAAGCCTTTAAGGGGTTTTGTACTTGTTGCTAGGGAAGTGGGAACTCACTTGCCTGAAACTACAGATATTGACAACCATGAAAAGTTACCTCCTTTGAGAAATCCCCTTGATTTTAAGTTAGTTTGGAATCCAAATGGAGGAAGTCAGGAAATGTCAAGTGAAAGTGGTTACTTTTGGCTACCCCAGCCTCCTGAAGGTTACAAGGCCCTTGGCTACTTGGTTACTAACAAACCAGACAAGCCTGAGTTGGATGAAATGTGCTGTGTGCGTGCTGACCTTACTGACAAATGTGAACCTCACCGCCTAATACTTGATGTTGGTTCCAAAATTCCAGAGTTTTCATTTCAAGTATGGAGCTTGAGACCTTGTGACCGTGGCATGCTGGGGAAAGGGGTTTCTGTTGGGACATTTTTCTGCAGTAGTGGTGGGAACATGGGACAAGACCATTCTGTTGCATGCTTGAAGAATCTAAATCCTGTGCTACCAGCAATGCCAAATTTGCAGCAAATACATGCACTTATTAAGCATTATGGCCCTACTGTTTTCTTTCATCCTGAGGAAACTTACTTGCCATCTTCTGTGGCTTGGTTTTTCAACAATGGAGCCCTGTTGTGCAGAAAGGACGTGTCTACAGGAGAGGGAATTGATGCAACTGGCTCAAATTTACCATGTGGGGGAACAAATGATGGGAAGTTTTGGATAGACTTGCCAAGTGATAATAGAAAGGATTTTCTCAAACGTGGGGACTTGGAAAGTGCAAGGCTTTATGTTCATGTGAAGCCAGCTCTTGGTGGAACTTTTACAGACATTGCAATGTGGATTTTTTGCCCCTTCAATGGGCCAACCACTCTGAAAATTGGAATTAAGAATATACCATTGGGCAAGGTTGGAGAACATGTTGGTGACTGGGAGCATTTTACACTTCGAATATGTAATTTCACTGGAGAGCTCTATAGTATATACTTCTCACAGCACAGTGGCGGTGAATGGGTAGATCCCTATGACTTGGAATACATTGATGGCAATAAAGCTATTGTTTACTCATCAAAAAATGGACATGCAAGTTACCCTCATCCTGGGACCTATATCCAAGGGTCTGCTAAACTGGGGCTTGGCATTAGGAATGATGCCGCTCGCAGTAATTTGTATGTGGATTCTAGTACTCACTATGAGATTGTTGCAGCTGAGTATCTTGAAAATGTTGTTACTGAGCCTCAATGGTTGCAGTTTATGAGAGAGTGGGGCCCCAAAATTGTTTATGATACAAAAACTGAGCTGGATAAGATTATCAATGCTCTTCCTCGCATGCTTCAATATTCAATGAGGAGCTTAATTAACAAGTTTCCAGTGGAGCTGTATGGTGAGGAAGGTCCTACTGGGCCAAAAGAAAAAAATAATTGGATACATGATGAAAGATGGTGA 1710 0.4228 MIGYKCFRRNTTFAQSSSLHPQIFSLPAPIPQWPEGQGFASGLVNLGEIEIFKVTRFEFIWSCSAILDTKNAVTFYKPCGIPDGFHILGHYCQPCDKPLRGFVLVAREVGTHLPETTDIDNHEKLPPLRNPLDFKLVWNPNGGSQEMSSESGYFWLPQPPEGYKALGYLVTNKPDKPELDEMCCVRADLTDKCEPHRLILDVGSKIPEFSFQVWSLRPCDRGMLGKGVSVGTFFCSSGGNMGQDHSVACLKNLNPVLPAMPNLQQIHALIKHYGPTVFFHPEETYLPSSVAWFFNNGALLCRKDVSTGEGIDATGSNLPCGGTNDGKFWIDLPSDNRKDFLKRGDLESARLYVHVKPALGGTFTDIAMWIFCPFNGPTTLKIGIKNIPLGKVGEHVGDWEHFTLRICNFTGELYSIYFSQHSGGEWVDPYDLEYIDGNKAIVYSSKNGHASYPHPGTYIQGSAKLGLGIRNDAARSNLYVDSSTHYEIVAAEYLENVVTEPQWLQFMREWGPKIVYDTKTELDKIINALPRMLQYSMRSLINKFPVELYGEEGPTGPKEKNNWIHDERW. 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00410 569 PANTHER BNAC01G40110D PROTEIN 1 569 - -
Seca6g00410 569 Pfam Vacuolar protein sorting-associated protein 62 21 567 IPR009291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00410 Seca-Chr6 11876154 11878602 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00410 - - gmx:100793026 906.36