Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00391 ATGGCGTCGAGTGTTTTGAGGAACCTCATCAGATTTTCAGCATCGACGACGACGGCCACCAGAAGTTTCAGCCTCGCAACCACAAACACTCAAATCAGCAACCACACCGCCAAGTGGATGCAGGATACAAGCAAGAAATCTCCAATGGAGCTGATTAATGAAGTGCCACCTATTAAGGTTGAAGGCAGGATAGTTGCTTGTGAAGGAGATACCAATCCCGCCCTTGGACACCCAATTGAATTTATATGCCTTGACCTGCCCGAGCCAGCTGTTTGCAAATATTGTGGCCTACGTTATGTTCAGGACCATCACCATTAG 318 0.478 MASSVLRNLIRFSASTTTATRSFSLATTNTQISNHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDTNPALGHPIEFICLDLPEPAVCKYCGLRYVQDHHH. 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00391 105 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-A SUBUNIT 5 105 - -
Seca6g00391 105 Gene3D q5lls5 like domains 51 101 - -
Seca6g00391 105 Pfam Zinc-finger domain 62 99 IPR019401 -
Seca6g00391 105 FunFam NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial 51 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00391 Seca-Chr6 11267928 11270649 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00391 K03939 - gmx:100305499 184.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00391 6 11267928 11270649 Seca6g00391 6 11267928 11270649 ECH