Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00372 ATGTTTGGGCAACTTGAGCATGAACTAGAGTTGCATGTGCCGGCGAGTGAGGCATGGGATCTCTTTGGCACTCTTCAAATAGGAAAACTTGTTGAGAAAGAGATGCCTCATAAGTTTCAGAAGGTGGAGCTAACAGAAGGAGATGGAGGGGTTGGGACTATCCTCAAACTTACATTCACTCCAGGTGTACTTGGGCCAGCCAGCTGCAAAGAGAAATTCACCAAGATTGATAATGAGAAGCGCATCAAAGAATCTGAGGTAGTTGAAGGAGGGTACTTGGAATTAGGATTCACTCTGTTTAGAATTCGCTTTCAAGTGATAGAGAAAGGTGAAGATTCAAGCATAATCAAATCTACAATTGAGTATCAAGTCAAGGAAGAGGATGCAGCAAATGCCTCACTTGTTTCCATTCAATCAGTGGCAAACATTGCACAAGTTGCCAAAAATTACCTTAATAGAAACAAGGCTGCAAAAGAAGCAAATTAA 486 0.4156 MFGQLEHELELHVPASEAWDLFGTLQIGKLVEKEMPHKFQKVELTEGDGGVGTILKLTFTPGVLGPASCKEKFTKIDNEKRIKESEVVEGGYLELGFTLFRIRFQVIEKGEDSSIIKSTIEYQVKEEDAANASLVSIQSVANIAQVAKNYLNRNKAAKEAN. 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00372 161 FunFam S-norcoclaurine synthase 1 156 - -
Seca6g00372 161 CDD Bet_v1-like 3 128 - -
Seca6g00372 161 Gene3D - 1 156 IPR023393 -
Seca6g00372 161 Pfam Pathogenesis-related protein Bet v 1 family 3 149 IPR000916 GO:0006952
Seca6g00372 161 SUPERFAMILY Bet v1-like 4 151 - -
Seca6g00372 161 PANTHER - 5 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00372 Seca-Chr6 10793566 10794893 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00372 - - gmx:100305838 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00372 6 10793566 10794893 Seca6g00372 6 10793566 10794893 ECH