Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00370 ATGGCTTCAAAATCTAGATCCAATCTGTCTGAAAATTCCAACAAAGCATCACTGGCAACACCAACAAGAGTCAGTAAAGTTAGCAAAGGAGTGTCCAAATCAGAATCTGAGTCACCATCACATTTGCACAATCCACGCCATTCTGTGGAACGATCACCACGATCTGTGAATTCAAAGACCACTGCTGAGCGGAAATTACCAAGACCTGTCTCCACCCCACCTGATAAACAATCCCCAAGAGCTGCAAAGGGTTCAGAATTGCAGAACCAGTTGAACCTTGCTCAAGAAGATCTAAAGAAAGCAAAGGAGCAGCTCCTTCAGGCTGAGAAGGAGAAGCTAAAAGCAATTGATGAGTTGAAAGAAGCACAGAAAGTGGCTGAGGAAGCAAATGAGAAACTCAGGGAAGCATTAGTGGCTCAAAAGCGAGCTGAGGAGAACTCTGAGATTGAAAAATTCCGAGCTGTTGAATTGGAACAGGCTGGAATTGAAAATGTGAAGAAGAAGGAAGAAGAATGGGAGAAGGAGCTTGAAAGTGTGAAGAACCAACATGCTTTGGATGTGGCTGCTCTCCTTTCCACCACTCAGGAGCTTCAGCGGGTTAAACAAGAACTCGCCATGACTTGTGATGCAAAGAACCAGGCATTGAATCATGCTGATGATGCAACTAAAATTGCTGAGATTCAAGCAGAGAAAGCAGAGTTTCTTTCAGCTGAACTAACACGGTTGAAGGCCTTACTAGATTCAAAACTGGAAACAGAGGCTGGTGAAAATGAGCTTATATTGAACCTGAAAACAGAGATAGAAGCTCTCAAGCAAGAACTTGAAAAGGCCAAGGGTTATGATGAGAAGTTGACAGAGAAGGAAACTTCTATCGAACAGCTTAATGTGGAGCTTGAAGCCGCAAAGATGGCTGAATCTTATGCACATAGTGTACTAGAGGAGTGGAAGACAAGGGTTGAGGAACTAGAAATGAGATTTGAAGAAGCAAACAAGCTGGAGAGATCTGCATCAGAATCTTTGGAATCTGTAATGAAACAGCTAGAAGGAAGCAATGATTTGTTGCATGATGCAGAATCTGAAGTTGCAACTCTTAAAGAGAAGGTGGGATTGTTAGAAATGACAATTGGGAGACAGAGAACAGATGTTGAGGATTCAGAACGTCGACTTCTTATGGCTAAGGAAGAAAATCTTGAAAAGTCAAAGAAGATCGAGTCTCTCAAATCTGAACTTGAGACAGTCAAGGAAGAGAAAGACCAGGCTTTGAACAATGAACAGCTTGCAGCTTCTAGTGTGCAGACCCTATTAGAAGAGAAAAACAAACTTATCAATGAATTGGAGAATTCTAGGGATGAAGAAGAAAAGAGCAAAAAGGCAATGGAAAGCTTAGCTTCTGCATTACATGAAGTATCTGCAGAAGCTAGAGAAGCCAAAGAAAGTCTACTAAACAACCAAGCTGAAAGGGAAAGCTATGAGACCCAGATTGAAGATTTAAAGTTAGTCATAAAAGGTACTAATGAAAAATATGAGTCTCTGCTTGATGATGCCCGGCATGAGATTGATGTTCTTGTATGTAGTATTGAAAACTCTAAGAATGCCTTTGAGAACTCCAAGGCTGAGTGGGAGCAGAGAGAACTTCATCTACTCAGCTGCATAAAGAAAACCGAAGAAGAGAACACATCCCTTGAAAAAGAAATAAATAGATTGGTTTATTTGCTTAAAGAAACTGAAGAAGAAGCTAATGCCAAAAGGGAGGAAGAAGCTCAGTTGAAGGAAAATCTGAAAGAAGTTGAGGCTGAGGCAATCCACCTTCAGGAAGCTCTTAAGGAAGTAACAGCTGAGAACATGAAATTGAAGGAGAGTTTATTGGATAAAGAAAATGAGTTGCAGAGTATTTTCCAGGAAAATGATGAACTCCAATCCAGAGAAGCTGAATCTATAAAGAAGGTGGAGGAGTTATCGAAGCTGCTGGAAGAAGCTACAACCAGAAACCAGCCAATGGAAAATGGGGATCTTACAGACAGTGAGACTGAGAAGGACTATGATTTGCTTCCTAAAGTAGTTGAATTTTCTGAAGAGAATGGGCATAAAGGAGAAGATATTTCAAAGGTAGAGCTTTCAGTCAACCAGGAGGGACTCAAACAAGAAGAAAGTGTCTTGAATGAAAAGGCTGAAAAAATTGAATCTCCCAAACCTGAGGATGTGAATGGAAAACTGAAGGAAGATGATAACAAAGAAAAGGATGAACCTGTAGAAGTTGAATTTAAAATGTGGGAAAGCTGCAAGATAGAGAAAAAGGAGTTCTCGCCGGAGAGAGAAGCAGAGCCTGAATCATTTGAAGAGGAAATTGACTCAAAGATAGAAGGTGGTGAGAGCTTTGATAAGATAAATGGAACATCTGTAACAGAGAACATTGATGATGGTGGGAGCTCACCAACAAAACAACAACAACAATTGAAGAAGAAGAAGAAACCTTTGCTTGGCAAGTTTGGAAGCCTGCTCAAGAAAAAGGGTGCTAGCAATCAGAAATAG 2529 0.4077 MASKSRSNLSENSNKASLATPTRVSKVSKGVSKSESESPSHLHNPRHSVERSPRSVNSKTTAERKLPRPVSTPPDKQSPRAAKGSELQNQLNLAQEDLKKAKEQLLQAEKEKLKAIDELKEAQKVAEEANEKLREALVAQKRAEENSEIEKFRAVELEQAGIENVKKKEEEWEKELESVKNQHALDVAALLSTTQELQRVKQELAMTCDAKNQALNHADDATKIAEIQAEKAEFLSAELTRLKALLDSKLETEAGENELILNLKTEIEALKQELEKAKGYDEKLTEKETSIEQLNVELEAAKMAESYAHSVLEEWKTRVEELEMRFEEANKLERSASESLESVMKQLEGSNDLLHDAESEVATLKEKVGLLEMTIGRQRTDVEDSERRLLMAKEENLEKSKKIESLKSELETVKEEKDQALNNEQLAASSVQTLLEEKNKLINELENSRDEEEKSKKAMESLASALHEVSAEAREAKESLLNNQAERESYETQIEDLKLVIKGTNEKYESLLDDARHEIDVLVCSIENSKNAFENSKAEWEQRELHLLSCIKKTEEENTSLEKEINRLVYLLKETEEEANAKREEEAQLKENLKEVEAEAIHLQEALKEVTAENMKLKESLLDKENELQSIFQENDELQSREAESIKKVEELSKLLEEATTRNQPMENGDLTDSETEKDYDLLPKVVEFSEENGHKGEDISKVELSVNQEGLKQEESVLNEKAEKIESPKPEDVNGKLKEDDNKEKDEPVEVEFKMWESCKIEKKEFSPEREAEPESFEEEIDSKIEGGESFDKINGTSVTENIDDGGSSPTKQQQQLKKKKKPLLGKFGSLLKKKGASNQK. 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00370 842 MobiDBLite consensus disorder prediction 715 772 - -
Seca6g00370 842 Coils Coil 84 150 - -
Seca6g00370 842 MobiDBLite consensus disorder prediction 671 703 - -
Seca6g00370 842 MobiDBLite consensus disorder prediction 794 815 - -
Seca6g00370 842 Coils Coil 389 423 - -
Seca6g00370 842 Coils Coil 253 304 - -
Seca6g00370 842 MobiDBLite consensus disorder prediction 657 842 - -
Seca6g00370 842 Coils Coil 155 182 - -
Seca6g00370 842 Coils Coil 428 514 - -
Seca6g00370 842 MobiDBLite consensus disorder prediction 1 95 - -
Seca6g00370 842 Coils Coil 312 374 - -
Seca6g00370 842 MobiDBLite consensus disorder prediction 1 38 - -
Seca6g00370 842 MobiDBLite consensus disorder prediction 39 53 - -
Seca6g00370 842 Coils Coil 551 655 - -
Seca6g00370 842 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 13 836 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00370 Seca-Chr6 10758925 10763284 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00370 - - gmx:100777446 1208.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00370 6 10758925 10763284 Seca6g00370 6 10758925 10763284 ECH