Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00365 ATGTCTCTCTCTCTTCTTCGTATCTCTTCCACGCCTCACCTTTCTACCTCTCTTCTCCTTCCCCTTTCTTCCCCTTCCCCTCCTTTCCTATTCCATCTTCCTTCCCAATTACCAAATGGCCCCTCTGTTCTCTGCCGCTACAGACGCAGAGACGCCTCAGGCCTCTTCAGGGTCTGTTCCTTCTCCTCCCTTGGGGGTGCAGAGTTGAATGAAGGGGACCAACAAGAAGAAGAAGAAGAGGGTGATCAAATGAGGGCTACTTATGAAGATGAAGTAGAGGAAGAAGAAGGGGCTATTAACTCTTTAGTTTTGCCTGAAAGATGGGATGTTTTGGGTCTTGGACAAGCCATGGTAGACTTCTCTGGCACAGTTGATGATGAGTTCCTGAAGAATTTGGGATTAGAGAAGGGAACAAGGAAAGTTGTAAATCATGAGGAAAGAGGTAGAGTTTTGCGGGCTATGGATGGGTGCAGCTATAAAGCTGCAGCTGGTGGTTCTCTTTCTAATAGCTTAGTTGCCCTGGCAAGGCTTGGAAATCGCTCTGTGGAAGCTCCTGCCATAAATGTGGCAATGGCTGGCAGTGTAGGGAGTGATCTATTGGGTGGCTTCTACAGGTTTGCCCTCATTATTTCACTGTACTTGGAAAAATTACGCCGAGCAAATGTGCAATTTCTTTCTGCGCCTATCAAGGATGGGACAACTGGAACAGTTATAGTTCTCACAACTCCAGATGCCCAACGCACAATGCTTGCATACCAGGGCACATCTTCAACGGTTAATTACGACAGTTCCTTGGCCAGTGCAGTTTCCAAGACCAACATACTTGTTGTTGAAGGGTATCTATTTGAACTTTCTGATACTATTAAAACAATAACAAAAGCATGTAAGGAAGCTAGGAGCAATGGTGCCTTGGTTGCAATAACAGCTTCAGATGTCTCCTGCATTGAGAGACATTTCGATAATTTCTGGGAAATTGTTGGGAATTATGCGGATTTAATCTTTGCAAACGGGGACGAGGCGAGAGCTCTATGTAATTTTGATGCAAAGGAAAGCTGTGCTTCAGTTACAAGGTATCTAAGCCAGTTTGTTCCTCTAGTATCTGTTACTGATGGTCCAAGAGGCTCTTACATAGGTGTAAAAGGTGAAGCTGTATATATCCCTCCTTCTCCATGTGTTCCAGTAGATACTTGTGGTGCTGGGGATGCATATGCATCTGGCATACTCTATGGTGTTTTAAGAGGCATTTCAGATTTGAGAAGTATAGGTACAATAGCAGCTAAGGTTGCAGCCACTGTTGTTGGACAACAAGGGACAAGGCTTAGGATTTCAGATGCAGTCAAATTGGCTGAATCTTTCACATTCAAAACATCCACTGTTCGATCAGATATTGGGACTGATCATATTTCCAGCATCTAA 1416 0.4449 MSLSLLRISSTPHLSTSLLLPLSSPSPPFLFHLPSQLPNGPSVLCRYRRRDASGLFRVCSFSSLGGAELNEGDQQEEEEEGDQMRATYEDEVEEEEGAINSLVLPERWDVLGLGQAMVDFSGTVDDEFLKNLGLEKGTRKVVNHEERGRVLRAMDGCSYKAAAGGSLSNSLVALARLGNRSVEAPAINVAMAGSVGSDLLGGFYRFALIISLYLEKLRRANVQFLSAPIKDGTTGTVIVLTTPDAQRTMLAYQGTSSTVNYDSSLASAVSKTNILVVEGYLFELSDTIKTITKACKEARSNGALVAITASDVSCIERHFDNFWEIVGNYADLIFANGDEARALCNFDAKESCASVTRYLSQFVPLVSVTDGPRGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGVLRGISDLRSIGTIAAKVAATVVGQQGTRLRISDAVKLAESFTFKTSTVRSDIGTDHISSI. 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00365 471 MobiDBLite consensus disorder prediction 71 86 - -
Seca6g00365 471 MobiDBLite consensus disorder prediction 67 86 - -
Seca6g00365 471 CDD adenosine_kinase 107 441 - -
Seca6g00365 471 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 395 408 IPR002173 GO:0016301
Seca6g00365 471 SUPERFAMILY Ribokinase-like 108 440 IPR029056 -
Seca6g00365 471 PANTHER SUGAR KINASE 105 449 - -
Seca6g00365 471 Gene3D - 106 447 IPR029056 -
Seca6g00365 471 FunFam Putative sugar kinase slr0537 111 444 - -
Seca6g00365 471 Pfam pfkB family carbohydrate kinase 159 440 IPR011611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00365 Seca-Chr6 10563215 10568609 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00365 - - lang:109355577 672.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00365 6 10563215 10568609 Seca6g00365 6 10563215 10568609 ECH