Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00357 ATGGTAGCTGACAGAGATTTCGCCGTCGCCGATAAAGCCCTCATATTCACCTATGGTACTTTGAAGAGAAACTTCTCCAACCACCCTCTTCTCCAAGACCTCATGCGCACCGGTGACGCTTCCTTCATCGGAACCTACCGCACCGCCAACAACTACCCCCTCGTCTGTGGTCCCTACCGTGTCCCCTTCCTTCTCAACTTACCCGGCTCCGGTCAACCTGTCCACGGCGAACTTTACTCCGTCTCCGCCCGCGGCCTCGTCCGAATGGATGAACTCGAAGGCACCTCACGCGCTCACTACGAGCGTCTCCCTATCAAACTCGTCCCCGATCAGGAGGAAGAAAACGATGATGACGCGCCGGGGAGGCTAACGTGCGCTGAGGCCTACTATGCGCACCATAACTACGCGATGGAGCTTTGGAAGAAGAACGGGAAGAGAGGGTTGAGGTGTTATTCGGAGAAAGAAGCGATTGGTTATGTCAAACGCAAAGATAGGCCTCAGCATTTGACCTTTCTCGATCACATTCGCTTGTTCCTTTCTGATTGA 546 0.5403 MVADRDFAVADKALIFTYGTLKRNFSNHPLLQDLMRTGDASFIGTYRTANNYPLVCGPYRVPFLLNLPGSGQPVHGELYSVSARGLVRMDELEGTSRAHYERLPIKLVPDQEEENDDDAPGRLTCAEAYYAHHNYAMELWKKNGKRGLRCYSEKEAIGYVKRKDRPQHLTFLDHIRLFLSD. 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00357 181 CDD GGCT_like 15 114 IPR013024 -
Seca6g00357 181 Gene3D - 13 165 - -
Seca6g00357 181 PANTHER TROPONIN C-AKIN-1 PROTEIN 13 180 IPR039126 GO:0061929
Seca6g00357 181 FunFam Putative gamma-glutamylcyclotransferase 3 165 - -
Seca6g00357 181 Pfam Gamma-glutamyl cyclotransferase, AIG2-like 15 131 IPR009288 -
Seca6g00357 181 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 13 136 IPR036568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00357 Seca-Chr6 10366653 10367198 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00357 K19761 - gmx:100802936 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00357 6 10366653 10367198 Seca6g00357 6 10366653 10367198 ECH