Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00343 ATGGGTTGGGGAAGGGGAATATTCGAAGGAACTGTGGTGGTGGGATGTCTGTGTTCACTGGGTTGGGCTGGTCTTTGGTTCTTGAACCGTCGCCTCTACAAGGAATACGAAGAGAAACGAGTCCTCGTTCAGATCATCTTCAGCGTCGTCTTTGCCTTCTCTTGCAATCTCCTTCAGCTTGTTATCTTCGAAATCATTCCCATTCTCTCCAAAGAGGCAAGAGTGGTGAACTGGAAGATCGACTTGTTTTGTTTGATCCTGTTACTGGTCTTCCTCCTTCCCTATTATCATTGTTACTTGATGCTTAAAAACAATGGTGTGAGGACCGAAAGGGCTTCACTTGGAGCTGTTTTGTTCTTGCTCGCATTTCTTTATGCCTTTTGGCGAATGGGCATTCACTTTCCAATGCCATCACCTGATAAAGGTTTCTTCACTATGCCTCAACTGGTGAGTAGAATTGGGGTGATTGGTGTTACTGTCATGGCTGTTCTATCTGGTTTTGGTGCTGTAAACTTGCCATACAGTTATTTATCACTTTTCATCAGAGAGATTGAAGAAACAGAGATCAAGGCCTTGGAAAGACAACTAATGCAGTCGATTGAGACTTGTATATCAAAGAAAAAGAAAATTATTCTTTGCCAAATGGAGATGGAGCACAAGCAAGGATCTGAGGAGAAGTTAAATGCTAGATCTTTAATTAAACGTATAGTTGGCACGGTTGTTCGATCTGTGCAAGAGGACCAAAAGGAGCAAGATATCAAAGGCATGGAAGCAGAGGTACTGGCTTTAGAAGAGCTTTCAAAGCAATTGTTCTTGGAGATCTATGAGCTTCGTCAAGCAAAGGAAGCTGCTGCTTATTCTCGAACTTGGAGAGGACATATGCAGAATCTACTTGGCTATGCTTGTTCTGTCTATTGTGTGTACAAAATGATTAAGGTATTGTGA 945 0.4233 MGWGRGIFEGTVVVGCLCSLGWAGLWFLNRRLYKEYEEKRVLVQIIFSVVFAFSCNLLQLVIFEIIPILSKEARVVNWKIDLFCLILLLVFLLPYYHCYLMLKNNGVRTERASLGAVLFLLAFLYAFWRMGIHFPMPSPDKGFFTMPQLVSRIGVIGVTVMAVLSGFGAVNLPYSYLSLFIREIEETEIKALERQLMQSIETCISKKKKIILCQMEMEHKQGSEEKLNARSLIKRIVGTVVRSVQEDQKEQDIKGMEAEVLALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYACSVYCVYKMIKVL. 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00343 314 Pfam The Golgi pH Regulator (GPHR) Family N-terminal 143 209 IPR022535 GO:0016020
Seca6g00343 314 PANTHER G-PROTEIN COUPLED RECEPTOR 89-RELATED 11 313 IPR015672 -
Seca6g00343 314 Coils Coil 182 202 - -
Seca6g00343 314 Coils Coil 246 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00343 Seca-Chr6 10050896 10061412 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00343 - - gmx:100814132 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00343 6 10050896 10061412 Seca6g00343 6 10050896 10061412 ECH