Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00324 ATGAGTTTGAGTATTAACAAAATCCACCCTGGAGGGGATGCGGTGAAGCCCTTCAAGATTTTCGTGGGCTATGATCCACGTGAAGATATTGCTTTTGAGGTTTGTCGCCACTCCCTCTTGAAGAGATCTTCAATCCCTGTTGAGATCATTCCAATCAAACAATCAGATCTAAGGGAAATTGGCTTGTATTGGCGTGAAAGGGGCCAAACTGAGAGCACTGAGTTCTCCTTTACAAGATTCTTCACTCCTTACTTAGCCAACTACCAAGGTTGGGCCATGTTTGTGGATTGTGATTTCCTTTACTTGGCAGATATTAAGGAACTGCAAGACTTGGTTGAGGACAAGTATGCTATCATGTGTGTTCAACATGACTATACTCCAAAGGAGACAACCAAAATGGATGGGGCAGTGCAAACTGTGTACCCAAGAAAGAATTGGTCTTCAATGGTGTTGTATAATTGTGGACATTCCAAGAACCGTGTTCTCACCCCTGATGTTGTCAATACAGAGAGTGGTGCTTTCCTTCACAGGTTTCAATGGCTTGAGGATAATGACATTGGGTCGATCCCAATTGTTTGGAACTTTCTTGAGGGGCATAACAAGGTTGTTGAGAATGACCCAACTACTTACCCAAAAGCCATACATTATACTCGTGGGGGCCCATGGTTTGAAGCATGGAAGAATTGTGAATTTGCTGAACTCTGGCTGAATGAAATGGAAGATTACCTTAAGGAAGCCAAAAAAGAAATTACTGATTAG 759 0.4256 MSLSINKIHPGGDAVKPFKIFVGYDPREDIAFEVCRHSLLKRSSIPVEIIPIKQSDLREIGLYWRERGQTESTEFSFTRFFTPYLANYQGWAMFVDCDFLYLADIKELQDLVEDKYAIMCVQHDYTPKETTKMDGAVQTVYPRKNWSSMVLYNCGHSKNRVLTPDVVNTESGAFLHRFQWLEDNDIGSIPIVWNFLEGHNKVVENDPTTYPKAIHYTRGGPWFEAWKNCEFAELWLNEMEDYLKEAKKEITD. 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00324 252 Coils Coil 236 252 - -
Seca6g00324 252 SUPERFAMILY Nucleotide-diphospho-sugar transferases 20 241 IPR029044 -
Seca6g00324 252 PANTHER EXPRESSED PROTEIN 13 249 - -
Seca6g00324 252 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 3 249 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00324 Seca-Chr6 8345272 8346030 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00324 - - cave:132184575 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00324 6 8345272 8346030 Seca6g00324 6 8345272 8346030 ECH