Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00322 ATGGCCACGCTGACGAGAAGCCCAACCAGCATGGGTTCACTGTCATATCACGTGCAATCATCCCCTTCTCACCAACTTCCAAGCCAACGCCTATACAAATACAAGAGACGTGCTGCCACTGCCACTTTCACCACTACTTGGTCCGGAGTCGGGTCACGGAGACACATTCGGGTATCGACGGCAAGAACGAGGGGACAAGAGATGGTGTTGGAGAGAGAGAAGACAGAGGAAGAGAAGCAACTGCAGTTGGGAATCGCCGAGTTCTACGACGAGTCGTCTGGGATATGGGAGAATATTTGGGGTGACCATATGCACCACGGGTTTTACGACCCGGATTCGACCGTTTCGGTTTCGGATCACCGCTCTGCTCAGATCCGAATGATCGAAGAGTCTCTTCGTTTTGCCGCCGTTTCTTCTGAGGACCCAACCAATTGGCCTAAGAGTATAATTGATGTTGGCTGTGGCATAGGGGGCAGCTCCAGATACCTGGCCAAGAAATTTGGGGCAAGGAGCATTGGCATTACTTTGAGTCCTGTTCAAGCCGAAAGAGCAAATGCTCTTGCTGCTGCTCAAGGATTGGCTGACAAGGTTTCGTTCCAAGTTGCTGATGCTCTGGAGCAACCATTCGCTGATGGGCAGTTTGATCTGGTGTGGTCTATGGAGAGTGGAGAGCATATGCCTAATAAAGCGAAGTTTGTTGGAGAGTTAGCCCGAGTAGCAGCACCAGGTGGCACCATAATAATAGTAACATGGTGCCACAGGGATCTTGGTCCAGGTGAAGAATCCCTACATCCATGGGAAAAAAATCTCTTGAAGAGGATATGTGATGCATATTACCTTCCAGCGTGGTGCTCAACTGCTGATTATGTCAAATTGCTCGAGTCCCTTTCACTTCAGGACATCAAGTCAGCAGATTGGTCTCCCTTTGTTGCTCCATTTTGGCCAGCAGTGATACGCTCAGCATTGACATGGAGGGGTCTCACTTCACTCTTGCGCAGTGGTAAGCTCAAAGTACAATTCTTAAATCATTGA 1032 0.4952 MATLTRSPTSMGSLSYHVQSSPSHQLPSQRLYKYKRRAATATFTTTWSGVGSRRHIRVSTARTRGQEMVLEREKTEEEKQLQLGIAEFYDESSGIWENIWGDHMHHGFYDPDSTVSVSDHRSAQIRMIEESLRFAAVSSEDPTNWPKSIIDVGCGIGGSSRYLAKKFGARSIGITLSPVQAERANALAAAQGLADKVSFQVADALEQPFADGQFDLVWSMESGEHMPNKAKFVGELARVAAPGGTIIIVTWCHRDLGPGEESLHPWEKNLLKRICDAYYLPAWCSTADYVKLLESLSLQDIKSADWSPFVAPFWPAVIRSALTWRGLTSLLRSGKLKVQFLNH. 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00322 343 PANTHER METHYLTRANSFERASE 90 320 - -
Seca6g00322 343 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 85 326 IPR029063 -
Seca6g00322 343 Gene3D Vaccinia Virus protein VP39 90 340 IPR029063 -
Seca6g00322 343 MobiDBLite consensus disorder prediction 1 23 - -
Seca6g00322 343 Pfam Methyltransferase domain 151 248 IPR013216 GO:0008168
Seca6g00322 343 CDD AdoMet_MTases 149 251 - -
Seca6g00322 343 ProSiteProfiles SAM-dependent methyltransferase gamma-tocopherol (gTMT)-type family profile. 70 343 IPR025774 GO:0008168|GO:0032259
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00322 Seca-Chr6 8301437 8306209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00322 147 261 Acyl Lipid Metabolism Gene Families AT3G18000 33.913 1.89e-15 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00322 K05928 - gmx:100792443 473.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00322 6 8301437 8306209 Seca6g00322 6 8301437 8306209 ECH