Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00321 ATGAAACCACAAACAAATGGGGTGTCTAGAGTTCACAAGGCAAATAATGTTCAAGTTGAAGGGCCTAACTGGCTCATTATTGCTGCTGGTGCTTTGTTGAGTACATTATCCATTCGCCTTGGTTACAAGTTGAAGCAGGCACTTGACTCAAAGCCCAAGCAGAATGCAACTACTATTCAGAAAGGGTCCAACACAAGGAAATCAGCAGATTGCTTTATGCAAACACAAGATAATCATGGATGCTTCAGTTGCATTTCAGGAACTGGAAGTGCTATGGAACTAAAGTGCCCACCAAATGGCCAGATGCTGAGTGAATTTGATGGGGCCCTCCCTTTGGTGACTGTTCCTACAGCTGAATTTAGCAAGGAAAATGGTGTTGTCTGGGCATGCTCTCCTGATCGTCTGGAATTGCCTTCAAAGCCATTCCACCATTCAAACTGCTCAGATTCACCATGTGTATCAGAATCTGGTTCTGACATTTTTAGTAAGCGGGAAGTCATACAGAAACTGCGTCAACAATTGAAGAGAAGAGATGATATGATACTAGAGATGCAAGATCAAATGGCTGAATTGCAAAATTCACTCAATGCTCAGCTGGGGCTTTCTTCTCATTTGCAGTTGCAGCTTGATGCTGCAAACAGGGACTTATTTGATTCAGAGAGAGAGATCCAACGGCTAAGGAAAGCAATTGCAGATCACTGTGTTGGACATGTTCCCCATGACAAATCTTCCACGGTCACAGCTTGGTCTGCTGAGACTAGAAATGGCCATTCAAATGGGCATCTTGATGGGGAGAATAATTTAGAGCCTCCTGAAAAAGTAAGGGATGATGAGGAGAGAATTGAGATGCTGAAAAGGCAAGTGGGAGAGTTGAAAGAGGTAATAGAAGGGAAAGAATACTTGCTCCATAGCTATAAGGAGCAAAAGGCAGAACTCTCTCTAAAGATCAGGGAATTGCAGCAAAGATTGGATTCTCAGCTGCCTAATATTTTGTAG 996 0.4307 MKPQTNGVSRVHKANNVQVEGPNWLIIAAGALLSTLSIRLGYKLKQALDSKPKQNATTIQKGSNTRKSADCFMQTQDNHGCFSCISGTGSAMELKCPPNGQMLSEFDGALPLVTVPTAEFSKENGVVWACSPDRLELPSKPFHHSNCSDSPCVSESGSDIFSKREVIQKLRQQLKRRDDMILEMQDQMAELQNSLNAQLGLSSHLQLQLDAANRDLFDSEREIQRLRKAIADHCVGHVPHDKSSTVTAWSAETRNGHSNGHLDGENNLEPPEKVRDDEERIEMLKRQVGELKEVIEGKEYLLHSYKEQKAELSLKIRELQQRLDSQLPNIL. 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00321 331 Coils Coil 274 294 - -
Seca6g00321 331 Coils Coil 302 322 - -
Seca6g00321 331 Coils Coil 167 187 - -
Seca6g00321 331 PANTHER OS05G0587400 PROTEIN 1 331 - -
Seca6g00321 331 Coils Coil 209 229 - -
Seca6g00321 331 MobiDBLite consensus disorder prediction 253 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00321 Seca-Chr6 8288908 8292955 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00321 - - ccaj:109798953 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00321 6 8288908 8292955 Seca6g00321 6 8288908 8292955 ECH