Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00297 ATGGGTTCAGCACCAGAACTGTTACCTGAGAGAGGTTGCAGTAAGCTAATTGGTACACGGGTCCTACAGTACTTGAAAGGAAGCCCGGTTTCCTTCAAAACCTACCAAGCCATCGTTCTGATTGTAACATTTTTAGCTTATACTAGTTACCATGCCACTAGAAAAACCACAAGTATTGTAAAGAGTGTCCTTGATCCCCAATCCCAATCATCAGAGTTAGGCTTGAATTTCTTTCCCTTGAGGCTAACCAATTTCAATGAATCAACTGAATCAAGGAGACTTTCTTTGAAGCTTGGAGATGGCTGGGCTCCATTTAATGGAAGAGATGGGACATCCCTTCTTGGTGAATTGGATGTTGCTTTTCTTTCAGTATATGCTTTTGGGATGTACTTTTCTGGACATTTGGGTGACCGGTGTAATTTGAGGATTTTTCTAACAGTGGGGATGTTAGGAACTGGCTTGTTCACTTCACTCTTTGGTCTAGGATACTGGGGAAACATCCACAACTTCTATTACTATTTAGTAGTTCAAATGATTGCTGGATTGTTTCAATCCACTGGATGGCCATCAGTAGTTGCTGTTGTGGGAAATTGGTTTGGAAAGAGCAAGAGAGGGCTGATCATGGGAATTTGGAATGCTCACACTTCTGTTGGGAACATTGCAGGTTCTTTGATTGCTTCTGCTATGTTGACCTATGGATGGGGTTGGTCCTTTGTTGTGCCAGGACTTCTAACTGTTTTAATTGGTTTGGTGGTTTTCCTTATATTGCCTGTTTCACCTGAGTCTGTTGGAGCTGATAGAGAGGAAGATGAATATAGTTATCCCAAGAAAAGTGTAGATGAAGTGACAGAGCCTCTTTTAAGGCAAGAGTCTCCAGTTGAGGAGAAAGCAGTTGGGTTCATAGAGGCATGGAAAATTCCTGGAGTTGCTCCTTTTGCTCTTTGTCTGTTTTTTGCCAAATTGGTTGCATATACATTTCTCTATTGGCTCCCTTTCTATGTTAGCCACACAGCAATTGATGGGAAATATCTATCTAGTGAGACATCAGGAACTCTATCCACTTTATTTGATGTTGGAGGGGTTCTGGGAGGAGTTCTAGCTGGCCACATTTCTGATCGCTTAGATGCTAGAGCCATAACAGCAGCAAGTTTCATGTACTGTGCAATCCCTGCTCTGTTCTTCTATCGAAGTTATGGGCACGTTTCTTTGATTGTGAATGGAGCATTGATGTTCGTCACTGGCATGTTTGTGAATGGACCTTATGCTCTTATAACAACTGCTGTTTCAGCTGACCTGGGAACACACAAGTCATTGAGGGGAAATTCACGAGCTCTAGCAACTGTCACGGCAATCATAGATGGAACAGGTTCTATAGGGGCTGCAATTGGACCTTTGTTAACAGGTTACATATCTGCAAAGAGCTGGAGTGCAGTTTTCACAATGTTGATGGCAGCTGCTTTAGTTGCAGGGCTGCTTCTGACCAGGCTTGTTATGGCAGAGGTGGCCACAAAGATTGAAGAATCAAGGTCTAATAGAGCACAGGAAGGTCCACTTGAAGTATAA 1563 0.428 MGSAPELLPERGCSKLIGTRVLQYLKGSPVSFKTYQAIVLIVTFLAYTSYHATRKTTSIVKSVLDPQSQSSELGLNFFPLRLTNFNESTESRRLSLKLGDGWAPFNGRDGTSLLGELDVAFLSVYAFGMYFSGHLGDRCNLRIFLTVGMLGTGLFTSLFGLGYWGNIHNFYYYLVVQMIAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSVGNIAGSLIASAMLTYGWGWSFVVPGLLTVLIGLVVFLILPVSPESVGADREEDEYSYPKKSVDEVTEPLLRQESPVEEKAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAIDGKYLSSETSGTLSTLFDVGGVLGGVLAGHISDRLDARAITAASFMYCAIPALFFYRSYGHVSLIVNGALMFVTGMFVNGPYALITTAVSADLGTHKSLRGNSRALATVTAIIDGTGSIGAAIGPLLTGYISAKSWSAVFTMLMAAALVAGLLLTRLVMAEVATKIEESRSNRAQEGPLEV. 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00297 520 Pfam Major Facilitator Superfamily 114 433 IPR011701 GO:0022857|GO:0055085
Seca6g00297 520 SUPERFAMILY MFS general substrate transporter 111 497 IPR036259 -
Seca6g00297 520 Gene3D MFS general substrate transporter like domains 30 270 IPR036259 -
Seca6g00297 520 ProSiteProfiles Major facilitator superfamily (MFS) profile. 42 502 IPR020846 GO:0022857
Seca6g00297 520 PIRSF Hexose_phosphate_transp 24 515 IPR000849 GO:0016020|GO:0022857|GO:0055085
Seca6g00297 520 Gene3D MFS general substrate transporter like domains 303 511 IPR036259 -
Seca6g00297 520 FunFam Sugar phosphate exchanger 3 isoform 1 30 271 - -
Seca6g00297 520 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 17 513 - -
Seca6g00297 520 FunFam glucose-6-phosphate exchanger SLC37A2 isoform X1 299 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00297 Seca-Chr6 7692535 7696366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00297 1 519 Organic Solute Cotransporters AT3G47420 73.282 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00297 K13783 - gmx:100799211 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00297 6 7692535 7696366 Seca6g00297 6 7692535 7696366 ECH