Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00296 ATGGCGTCCTCTCTTACAGTGAAGCGCTTCCTCTCCTCTGGCCTTCTCTCCAGATCTCTCCTTCGCCCCGTCGCTTCTGCTTCCCGCTCCCTCAACACCAACGCCATGCGCCAGTACGATGACCATGCCGATGACCGCAGCCTCGACGTGGATCGTCGTTCTGATCGTCGCGCAGCACGTCGCGATGATTTCTTCTCAGGTAATGTGTTTGATCCATTTTCTCCAACTCGGAGCCTGAGCCAGGTTCTGAACATGATGGATCAATTCATGGAGAATCCGTTCCTCTCTGCTTCGCGCGGAATCGGAGCTGGAGTTCGTCGTGGCTGGGATGCGAGGGAGACAGAGGATGCTCTGCTTCTGCGTGTGGACATGCCTGGGCTTGGCAAGGAAGATGTGAAGATCTCGGTGGAGCAGAATACTCTCACCATCAAAGGTGAAGGTGCCAAGGAAAGTGAGGAGGAGGAAGGTGGTCGTCGCTACACTAGCAGAATTGACTTGCCAGACAAGCTTTACAAGATTGATCAGATCAAAGCAGAGATGAAGAACGGTGTGCTCAAAGTCATTGTGCCTAAAATGAAGGAGGAGGAGAGGAGTGATGTGTTCAATATTAAGGTTGAGTAG 621 0.525 MASSLTVKRFLSSGLLSRSLLRPVASASRSLNTNAMRQYDDHADDRSLDVDRRSDRRAARRDDFFSGNVFDPFSPTRSLSQVLNMMDQFMENPFLSASRGIGAGVRRGWDARETEDALLLRVDMPGLGKEDVKISVEQNTLTIKGEGAKESEEEEGGRRYTSRIDLPDKLYKIDQIKAEMKNGVLKVIVPKMKEEERSDVFNIKVE. 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00296 206 Pfam Hsp20/alpha crystallin family 111 205 IPR002068 -
Seca6g00296 206 Gene3D - 65 205 IPR008978 -
Seca6g00296 206 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 96 206 IPR002068 -
Seca6g00296 206 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 28 201 IPR044656 -
Seca6g00296 206 SUPERFAMILY HSP20-like chaperones 75 197 IPR008978 -
Seca6g00296 206 CDD ACD_sHsps-like 110 191 - -
Seca6g00296 206 FunFam 23.6 kDa heat shock protein mitochondrial 59 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00296 Seca-Chr6 7661035 7661799 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00296 K13993 - gmx:547852 280.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00296 6 7661035 7661799 Seca6g00296 6 7661035 7661799 ECH