Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00283 ATGGAAGAAAATAAGCAATCACGTTACGTCAAGCTCACTAAAGATCAGACGCCTCTCGAAGATATCGTCCCTGGTGAACTCAATCAACCAATTGAGGTTCCTCAGTTGGCTGTTCGCAAGTGCCATGAATGTAGACAGCCGCTACCTGAAAGCTATGCACCTCCTGCAGATGAACCTTGGATGACTGGGATCTTTGGATGTGCAGAGGACAGGGAAAGTTGTTTGACAGGACTGTTTTGTCCTTGTGTATTATTTGGGCGCAATGTAGAGAGCTTGAGGGAAGACACTCCTTGGACGGGGCCTTGCATTTGTCATGCCATTTTTGTTGAAGGTGGCATTTCTCTGGCAATAGCCACTGCAATTGCAACTTCTGTCTTTTCTGGTATTGATCCAGGGACAACATGTCTCATTTGTGAGGGTTTATTTTTCACATGGTGGATGTGTGGCATTCACACTGGTCAAATTCGGCAAACCTTACAGAAGAAATATCACTTGAAGAATTCACCTTGCAACGCATGTTGTGTGCACTGCTGCTTGCACTGGTGTGCCTTATGTCAAGAGCACAGAGAGATGAAGGGACGGCTTTCAGACAATGCTGTCTCACAAATGACCGTTGTAAACCCTCCTCCCATTCAAGAGATGAAGTCTACTGATGACAAGGAAAATCCTGAAACCTCTTCTTCTGCTAACAACAATGACCATACTGTTTTGGAGATGCAGCCTATATGA 729 0.4513 MEENKQSRYVKLTKDQTPLEDIVPGELNQPIEVPQLAVRKCHECRQPLPESYAPPADEPWMTGIFGCAEDRESCLTGLFCPCVLFGRNVESLREDTPWTGPCICHAIFVEGGISLAIATAIATSVFSGIDPGTTCLICEGLFFTWWMCGIHTGQIRQTLQKKYHLKNSPCNACCVHCCLHWCALCQEHREMKGRLSDNAVSQMTVVNPPPIQEMKSTDDKENPETSSSANNNDHTVLEMQPI. 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00283 242 NCBIfam uncharacterized Cys-rich domain 59 192 IPR006461 -
Seca6g00283 242 Pfam PLAC8 family 60 190 IPR006461 -
Seca6g00283 242 PANTHER DUF614 FAMILY PROTEIN-RELATED 56 199 IPR006461 -
Seca6g00283 242 MobiDBLite consensus disorder prediction 223 242 - -
Seca6g00283 242 MobiDBLite consensus disorder prediction 206 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00283 Seca-Chr6 7042065 7046595 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00283 - - psat:127107979 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00283 6 7042065 7046595 Seca6g00283 6 7042065 7046595 ECH