Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00271 ATGCCTAATTTCCCTTCTAATTCTTCTTCTTCTTCTTCTTCTTCAATGGAATCCTGTAATTGGATTCTCAAACATGTATCCATTTTACTGGTTTTCTTCCTTAGTTTCTCAACCTCTGCGACTCCTCCTTCCTCACTCTTCGACTTTGTGATTACCAACACTACAACCTTACACCGCAATTTCACTGCGGTGTCCGATTTTAGAATGATAAATAGACGGATTTTGAAGGATTGCTCTGCTTCAAGTCCGTTTCTCAAAATCAATATCACCTCATCAAATTCTAAATTGTCAGATGAGGAGTTCGTAACCGTCACCGTCACCGGCGTTTCCAAGCCTTCAAGTGCTGATTGGGTGGCTATGATCTCACCATCAAGTTCTAATGTTGAAACTTGTATTCTCAATGAGTTCTACTATTTACAAACTGGTGATACTGCCAAACTTCCTCTGCTCTGCCATTACCCTGTCAAGGCACAATATATGAAAAGTGATCCAGATTACCTCAGTTGCAAGAAGAAAGAATGCAAGAAATACCAGAATGGGAAATGCACTGCCACAACTTGTAGTGGTTCAATAAAGTTCCATGTTATCAACATTAGAAGCGACATTGAGTTCGTGTTCTTCTCTGGTGGATTCCTCAAACCCTGCATTGTGGGAAGGTCCACCCCTGTGGGTTTTGCTAATCCCAAGAAGCCACTCTATGGGCATCTCTCAAGCACAGATTCAACTGGAACATCTGTAATGAGATTGACTTGGGTTAGTGGAGACAAGGAACCTCAGCAAGTCCAATATGGAGGTGGAAAAACAGTAACTTCAGCAATCACTACATTTTCACAAGATGATATGTGTAGTTCAGCACTGCCAAGTCCTGCCAAAGATTTCGGATGGCATGACCCAGGATACATCCATTCAGCACTTATGACAGGACTTAAGCCTTCAAGTACCTTCTCCTACAGATATGGAAGTGACTCAGTTGGCTGGAGTGAGCAAATCCAGTTTTCAACTCCACCTGCTGGAGGATCAAATGAGCTTAAATTCATTGCATTTGGAGATATGGGAAAGACTCCTCTTGATGCTTCAGAAGAACACTACATTCAGCCAGGAGCTCTTTCAGTTATTAAAGCTATAGCTAGTGATGTAAATTCCAACAATGTGAACTCAGTCTTTCACATTGGAGACATAAGCTATGCAACAGGTTTTCTAGCAGAATGGGATTTCTTCCTTAACCTTATCAGTCCAGTAGCTTCCAGACTTTCTTACATGACAGCAATAGGGAACCATGAGAGGGATTATGTAGATTCTGGTTCAGTTTATTCTACTCCTGACTCTGGTGGGGAATGTGGAGTACCTTACGAAACATACTTTCCAATGCCAACAGCAGCAAAGGACAAACCTTGGTACTCCATTGAGCAAGGAAGTGTTCATTTCACAGTAATATCAACTGAGCATGACTGGTCAGAAAATTCTGAGCAGTATGAATGGATGAAAAAGGACATGGCATCAGTTAACCGACAAAATACTCCTTGGCTAATCTTCATGGGACATAGACCGATGTACACCTCCAACCATGGATTGTTATCTTCTGATTCCAAATTTATTGAAGCTGTGGAGCCATTGTTGTTACAGAATAAGGTTGACTTGGTTCTTTTTGGCCATGTACATAATTATGAGAGAACTTGTGCTATTTATCAAAATAAATGCAAAGCCATGCCTACAAAAGATGGAAATGGAGTAGACACCTATGATAACAGAAATTACAGTGCCCCTGTGCATGCTGTCATTGGCATGGCTGGCTTCACCTTAGACCAGTTCTCGGACGATGTGGAGAGCTGGAGCCTCAAAAGGATTTCTGAGTTTGGTTATCTAAGAGCACATGCTACTAGGAAAGATTTAAACTTAGAGTTTGTGGTCTCCGCAACAAGAGAAGTTAAGGACAGTTTCCGCATTACAAAGTGA 1953 0.4147 MPNFPSNSSSSSSSSMESCNWILKHVSILLVFFLSFSTSATPPSSLFDFVITNTTTLHRNFTAVSDFRMINRRILKDCSASSPFLKINITSSNSKLSDEEFVTVTVTGVSKPSSADWVAMISPSSSNVETCILNEFYYLQTGDTAKLPLLCHYPVKAQYMKSDPDYLSCKKKECKKYQNGKCTATTCSGSIKFHVINIRSDIEFVFFSGGFLKPCIVGRSTPVGFANPKKPLYGHLSSTDSTGTSVMRLTWVSGDKEPQQVQYGGGKTVTSAITTFSQDDMCSSALPSPAKDFGWHDPGYIHSALMTGLKPSSTFSYRYGSDSVGWSEQIQFSTPPAGGSNELKFIAFGDMGKTPLDASEEHYIQPGALSVIKAIASDVNSNNVNSVFHIGDISYATGFLAEWDFFLNLISPVASRLSYMTAIGNHERDYVDSGSVYSTPDSGGECGVPYETYFPMPTAAKDKPWYSIEQGSVHFTVISTEHDWSENSEQYEWMKKDMASVNRQNTPWLIFMGHRPMYTSNHGLLSSDSKFIEAVEPLLLQNKVDLVLFGHVHNYERTCAIYQNKCKAMPTKDGNGVDTYDNRNYSAPVHAVIGMAGFTLDQFSDDVESWSLKRISEFGYLRAHATRKDLNLEFVVSATREVKDSFRITK. 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00271 650 Pfam Iron/zinc purple acid phosphatase-like protein C 587 645 IPR025733 -
Seca6g00271 650 PANTHER PURPLE ACID PHOSPHATASE-RELATED 47 650 - -
Seca6g00271 650 Gene3D - 231 338 - -
Seca6g00271 650 CDD MPP_PAPs 341 650 IPR041792 -
Seca6g00271 650 Pfam Fn3-like domain from Purple Acid Phosphatase 93 227 IPR040974 -
Seca6g00271 650 SUPERFAMILY Purple acid phosphatase, N-terminal domain 221 336 IPR008963 GO:0003993|GO:0046872
Seca6g00271 650 Gene3D - 339 650 IPR029052 -
Seca6g00271 650 Pfam Calcineurin-like phosphoesterase 343 555 IPR004843 GO:0016787
Seca6g00271 650 SUPERFAMILY Metallo-dependent phosphatases 342 640 IPR029052 -
Seca6g00271 650 Pfam Purple acid Phosphatase, N-terminal domain 235 334 IPR015914 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00271 Seca-Chr6 6842497 6851584 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00271 81 648 Miscellaneous Gene Families AT2G03450 32.273 5.26e-74 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00271 K22390 - gmx:100775839 1138.64