Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00243 ATGACGAGTAGTGTGAATCAATCAGACGTGAAGCTAAACTATCTTTCTTCCCCTCAAAATATTTCACGAAGATCTGCAAATTATAAACCTAACATTTGGAAATACAACTTCCTACAGTCACTTGACAGTAAATATGATACAGAAGAATTTGGTATGCAGTTAAGCAAGCAGTTGACTGAAGTAAAGGGTCTTTTTACTGAAGAGGTGAGCGTTTTGCAAAAATTAGAGTTGGTTGACTGGATCCAAAAACTAGGCCTTGCCAACCACTTTCAGAAGGAAATCAATGAGTTTCTTGAAAATACATATGTCTCTGTCAAAAATAGCAACAGTACTCCTATTGTACAAGAGAATTTGCATGTATCTGCACTATGCTTCAGGCTTCTAAGGCAGCATGGATATAAAGTTTTACCGGGCAACTTCTTAGATGAAAAGGGTATAAAGATGGAGAAAAATAGCTCCTTTGTTGGTGATGTTAGAGAAATTATGGAGCTTCTTGAGGCCACACATTTGAGCTTAGAAGGAGAACATATCTTGGATGAGGCCAAAAAACTTGCAATAGATTCTCTTAAGGGAGTGGTCCATGCCTTGGAGCTTCCTTCCCATCGGAGAGTTCCGTGGTTTAATGTGAAATGGCATGTGAAGCAATACCAAAAGGATAAACATATGGATCCCGTTTTACATGAATTGGCTAAATTGAACTTCAACATAATTCAGGCCAAACTTCAAAACGAGGTCAAAGAATTGTCCAGGTACATTAAATTATTAATTTTGAGCCACAACCAAAAAAAAAAAAAAAATTTAAATTTCTCATTTAGGTGGTGGGAGAATCTTGGCATAAAAAAAGACTTGAGCTTTGCAAGAAATAGGTTGGTTGAAAGCTTCATGTGTGCAGCAGGAGTTGCTTTTGAGCCTAAGTATAAATCTGTTAGGAAATGGCTCACTAAAGTGATCATTTTCGTACTAGTGATTGATGATGTTTATGATATACACGCCTCATTTGAAGAATTAAAGCCGTTCACAATGGCATTTGTCAGATGGGATGCCAAAGGACTTGAAGAACTTCCGAAGTACATGAGGATTTGCTTCAATGCACTGAAAGATGTGACGGATGAAATTGCTTATGAAATTGGCGGAGAAAAGAACTTTGATATGGTGTTACCTTATCTAAAGAAATCGTGGATAGACTTTTGCAAAGCATTATACAAGGAAGCAAAATGGTACAAAATGGGATATATTCCATCATTGAAGGAATATCTAAGTAATGCTTGGATTTCATCTTCGGGGCCAATAATTCTACTCCATTCATATTTCACTACAAAGCATGAATTAACACCACATGAGATAGACAATTTTCTACACACGTATGAAGATTTGGTCTACAATATATCTCTTGTAATTCGACTGTGCAATGATTTAGGGACCTCAGTGGCTGAAAGAGAGAGGGGTGATGCTGCTTCATCAATCCTATGCTATATGAATGAAATGGATGTTTCAGAGGAAGAAGCAAGAAAGCATATGCAAAACATCATAAACAAAGCATGGAAAAAGATAAATGGGCACTGCTCCACTAGAGTTACTTCGATGGAGCCATTTCTTACTCAAGCCAGAAATATGGCACGTGTGGCTCATACCCTTTATTTAAATGGAGATGGGTTTGGTATTCAGGACCGAGACATAAAAAAACACATCTTGTCACTTGTTGTTGAGCCATTATAG 1716 0.373 MTSSVNQSDVKLNYLSSPQNISRRSANYKPNIWKYNFLQSLDSKYDTEEFGMQLSKQLTEVKGLFTEEVSVLQKLELVDWIQKLGLANHFQKEINEFLENTYVSVKNSNSTPIVQENLHVSALCFRLLRQHGYKVLPGNFLDEKGIKMEKNSSFVGDVREIMELLEATHLSLEGEHILDEAKKLAIDSLKGVVHALELPSHRRVPWFNVKWHVKQYQKDKHMDPVLHELAKLNFNIIQAKLQNEVKELSRYIKLLILSHNQKKKKNLNFSFRWWENLGIKKDLSFARNRLVESFMCAAGVAFEPKYKSVRKWLTKVIIFVLVIDDVYDIHASFEELKPFTMAFVRWDAKGLEELPKYMRICFNALKDVTDEIAYEIGGEKNFDMVLPYLKKSWIDFCKALYKEAKWYKMGYIPSLKEYLSNAWISSSGPIILLHSYFTTKHELTPHEIDNFLHTYEDLVYNISLVIRLCNDLGTSVAERERGDAASSILCYMNEMDVSEEEARKHMQNIINKAWKKINGHCSTRVTSMEPFLTQARNMARVAHTLYLNGDGFGIQDRDIKKHILSLVVEPL. 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00243 571 Gene3D - 69 222 IPR036965 GO:0010333|GO:0016829
Seca6g00243 571 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 29 221 IPR008930 -
Seca6g00243 571 Gene3D Farnesyl Diphosphate Synthase 30 256 IPR008949 -
Seca6g00243 571 SFLD Terpene Cyclase Like 1 C Terminal Domain 264 570 IPR034741 -
Seca6g00243 571 PANTHER OS04G0344100 PROTEIN-RELATED 20 551 - -
Seca6g00243 571 FunFam Isoprene synthase, chloroplastic 259 561 - -
Seca6g00243 571 SUPERFAMILY Terpenoid synthases 222 571 IPR008949 -
Seca6g00243 571 Gene3D Farnesyl Diphosphate Synthase 264 561 IPR008949 -
Seca6g00243 571 Pfam Terpene synthase family, metal binding domain 228 516 IPR005630 GO:0000287|GO:0010333|GO:0016829
Seca6g00243 571 SFLD Isoprenoid Synthase Type I 264 570 - -
Seca6g00243 571 CDD Terpene_cyclase_plant_C1 23 570 IPR044814 GO:0010333|GO:0016102
Seca6g00243 571 Pfam Terpene synthase, N-terminal domain 32 192 IPR001906 GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00243 Seca-Chr6 5826481 5835022 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00243 K14173 - gmx:100812119 816.609