Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00235 ATGGGTTTCACCGAATCCACCCTTCTTCTACCTTCGGGTTCAGGTTCTGCCACCAAGAAAGTTCCTGAAGATAAATGGCACTTGGCTTACATCATCTATTTCACTCTTGGCCTTGGTTACTTGCTTCCTTGGAACGCTTTCATCACCGCCGTTGATTACTTCTCCTACCTTTACCCTGATGCCAACGTTGATCGCATCTTCGCCGTTGTTTACATGGTTGTGGGTCTCTTTGGCCTCTTCCTCATCATCCTCTACAGCCACAGATCAAACGCCTTTGTTCGGATCAACATTGGTCTTGCCTTGTTTGTCGTTTCACTCCTTGTGGTTCCGTTGCTTGATGCGTTTTATATTAGGGGTCGGGTCGGGTTGTACGATGGGTTCTATGTCAGCGCCGGGGCGGTTGGGCTTGCCGGTGTGGCTGATGCTTTGGTGCAAGGCTCCATTGTTGGTTCTGTCGGTGAGATGCCGGAGAGGTACATGCAAGCTGTCATCGCTGGCACTGCTGGTTCTGGTGTACTTGTTTCTGTCCTGAGGATATTTACAAAAGCTGTTTACCCACAAGATGCCTCTGGCCTGCAAAAGAGTGCAAATCTCTATTTTGCTGTATCAATTTTAATTGTGGTGATATGCACGGTTCTCTACAACATAGCGCACAGACTTCCTGTGATGAAGTACTATAATGAACTTAAGATTCAGGTGGTCTCTGCCGATGAAGACATTGGTCCCCTGACCGGATCTGTCTGGAGGTCAACTGTATGGGATACTGTGGGAAGAATCAAATGGTATGGGTTTGGCATCATGCTCATCTATGTTGTGACTCTGGCAATATTTCCAGGTTACATTACAGAGGATGTGCACTCTCAAGTTCTTAAGGATTGGTATCCAGTTCTCCTTATTACTTGCTATAATGTGTTTGATCTTGTTGGCAAGTGCTTGACTGCAGTATACCTCCTAGAGAATGCAAAAATTGCAATAGGTAGTTGCATAGCAAGATTGTTGTTTTTCCCTCTCTTCTTAGGGTGCTTGCATGGTCCCAAATTCTTCCGGACAGAGATTCCCGTGACAATACTGACCTGCCTCTTAGGGCTTACAAATGGCTACTTGACCAGTGTATTGATGATTCTGGCTCCTAAAACTGTAAAGTTTCAGCATGCTGAGACTGCAGGGATTGTGAGTGTGTTATTCTTAGTGCTTGGTCTGGCTTCTGGGTCTATTATAGCTTGGTTTTGGGTCATCTGA 1239 0.4592 MGFTESTLLLPSGSGSATKKVPEDKWHLAYIIYFTLGLGYLLPWNAFITAVDYFSYLYPDANVDRIFAVVYMVVGLFGLFLIILYSHRSNAFVRINIGLALFVVSLLVVPLLDAFYIRGRVGLYDGFYVSAGAVGLAGVADALVQGSIVGSVGEMPERYMQAVIAGTAGSGVLVSVLRIFTKAVYPQDASGLQKSANLYFAVSILIVVICTVLYNIAHRLPVMKYYNELKIQVVSADEDIGPLTGSVWRSTVWDTVGRIKWYGFGIMLIYVVTLAIFPGYITEDVHSQVLKDWYPVLLITCYNVFDLVGKCLTAVYLLENAKIAIGSCIARLLFFPLFLGCLHGPKFFRTEIPVTILTCLLGLTNGYLTSVLMILAPKTVKFQHAETAGIVSVLFLVLGLASGSIIAWFWVI. 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00235 412 PIRSF ENT 4 412 IPR002259 GO:0005337|GO:0016020|GO:1901642
Seca6g00235 412 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 388 412 IPR002259 GO:0005337|GO:0016020|GO:1901642
Seca6g00235 412 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 132 152 IPR002259 GO:0005337|GO:0016020|GO:1901642
Seca6g00235 412 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 351 367 IPR002259 GO:0005337|GO:0016020|GO:1901642
Seca6g00235 412 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 370 386 IPR002259 GO:0005337|GO:0016020|GO:1901642
Seca6g00235 412 Pfam Nucleoside transporter 134 411 IPR002259 GO:0005337|GO:0016020|GO:1901642
Seca6g00235 412 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 18 410 IPR002259 GO:0005337|GO:0016020|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00235 Seca-Chr6 5727435 5729665 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00235 5 412 Organic Solute Cotransporters AT1G70330 69.100 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00235 K15014 - gmx:100793043 696.812