Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00231 ATGGAAATTCTCTCATGTGGTTCTGCACCATGCTGCCAAGTGGTGAACTTGAAGTTGAAATTGGTTGACAAAACCTCAAGGTTTCACTCAGTTGGAAATTATAGGGTTTATTGTACCAATAACATTTCTAGACGTGGATTGGATCAGTCTTTCCTGGGGCAAAGAGATTTTGGGTCCTTAAATGTTCTTGAAGGCTCTGAAAGAATCAATTGCAAGGTCTATAGTGGAAGTTCTGATGGCTATGTGATTGGTGATGAAGAGGATGTAACAGATGAACCTGCCACAAACATTCTCATTCCAGGTCTTCCAGTTGAGTCAAATGGTGACTCTGGTGCTCCAATTAGTAGCTGCTTTTGGGAATGGAAGCCTCAACTTAAGGTACACTATGAGAAAGCTGGGTGTGGAAGCATGGATTCTCCACATGTTCTCTTTCTTCCTGGTTTTGGTGTTGGTTCTTTCCATTATGAGAAGCAACTCAAAGATTTGGGCCGTGATAATAGAGTATGGGCACTGGATTTTCTAGGCCAAGGAATGTCCCTGCCTTTTGAAGATCCTACTCCTCACTATAAGGAAAGGGCTATATCAAATGAAAATACTTCTTCATGGGGTTTTGGAGATGAAACAGAACCATGGGCAACTGAGCTTGTATACTCCATTGATTTATGGCAAGATCAAGTTCAGTACTTCATAGAAAAGGTCATAGGTGAACCAGTTTATGTTGTGGGCAACTCACTAGGAGGATTTGTTGCATTGTATTTTGCTGCACGTAATCCTCATTTAGTGAAAGGTGTCACATTGCTCAATGCAACACCATTTTGGGGATTTCTTCCTAATCCTATAAAGAATCCAGGCCTAGCAAAAATATTTCCTTGGGCAGGAACATTTCCCCTACCTGCTAATATAAGGAGGTTTACAGAATTTGTGTGGGAGAAAATTAGTGATCCTACAAGTATTGCTGAGATACTTAATCAGGTTTATGCAGATCATTCAACAAATGTAGATAATGTGTTTTCACACATAATTGAAACCACAAGGCATCCTGCTGCTGCAGCATCATTTGCTTCAATTATGTTTGCTCCTCAGCCAGAATTTTCTTTTAATGAAGCATTATCTAGATGTCGAAAAAACAATGTGCCAATCTGCCTCATGTATGGAAAAGAAGATCCCTGGGTGAAGCCAGTTTGGGGACTCCATGTTAAAAGGCAGGTTCCTGAAGCTCCATATTATCAAATCAGCCCTGCTGGTCACTGCCCTCATGATGAAGTCCCTGAGGTTATAAATTTCTTACTACGTGGGTGGATCAGAAACCTTGAGTCTCAGGGTTCTATATCATTGCCACTGCTTGATGATCTAGACAATATGAAACACACTAATGCTAGGGAGTTAGAATTTATGAGTGAAGGTTCAAGAAAATCAGTGATGGTAAGGTTTTTGGGCTCCAGATTGTCAATTTGGGACATGTTAAGAACTTACATCAACCCTCCCTCCAAGTCCAGGAAATTGGCAGCAAAACCTCAATGA 1521 0.4083 MEILSCGSAPCCQVVNLKLKLVDKTSRFHSVGNYRVYCTNNISRRGLDQSFLGQRDFGSLNVLEGSERINCKVYSGSSDGYVIGDEEDVTDEPATNILIPGLPVESNGDSGAPISSCFWEWKPQLKVHYEKAGCGSMDSPHVLFLPGFGVGSFHYEKQLKDLGRDNRVWALDFLGQGMSLPFEDPTPHYKERAISNENTSSWGFGDETEPWATELVYSIDLWQDQVQYFIEKVIGEPVYVVGNSLGGFVALYFAARNPHLVKGVTLLNATPFWGFLPNPIKNPGLAKIFPWAGTFPLPANIRRFTEFVWEKISDPTSIAEILNQVYADHSTNVDNVFSHIIETTRHPAAAASFASIMFAPQPEFSFNEALSRCRKNNVPICLMYGKEDPWVKPVWGLHVKRQVPEAPYYQISPAGHCPHDEVPEVINFLLRGWIRNLESQGSISLPLLDDLDNMKHTNARELEFMSEGSRKSVMVRFLGSRLSIWDMLRTYINPPSKSRKLAAKPQ. 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00231 506 Gene3D alpha/beta hydrolase 107 437 IPR029058 -
Seca6g00231 506 PANTHER PHEOPHYTINASE, CHLOROPLASTIC 1 496 IPR044211 GO:0015996|GO:0080124
Seca6g00231 506 FunFam Pheophytinase, chloroplastic 110 437 - -
Seca6g00231 506 Pfam Alpha/beta hydrolase family 142 425 IPR000073 -
Seca6g00231 506 SUPERFAMILY alpha/beta-Hydrolases 113 436 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00231 Seca-Chr6 5643908 5647163 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00231 - - gmx:100791985 802.357