Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00174 ATGATGAAGTTTGCAGGATATTCCCTGGCCGTTTCATTTTCTCCTATAACTATAAGTTCTCGTGTCTATAGAAACAGTTGCAGATTCCCCTTAGGTATTGTTTCTCGTAGGAATTTCCGCAGCTCAAGGTTCTTTTCCGTGAAAGAACAATCACATGATAAACCTGGGGCGCTTGCCAAGCACTATCTTCCTCCTTGGTTTAGTGTTGCTCCAATGATGGACTGGACAGATCATCACTATAGGACTCTAGCACGCCTCATATCAAAACATGCTTGGCTGTACACGGAGATGTATGCAGCTGAAACAATTGTTCATCAAAAGGACAATCTGGACAGGTTCTTGGCATTTTCTCCAGAACAACATCCCATTGTGCTTCAAATTGGAGGGAGTAATATTGAAAATTTAGCAAAAGCAACTGAACTTGCTAATGCCTATTGCTATGATGAGATCAACTTAAACTGTGGATGCCCTAGTCCGAGAGTAGCTGGACATGGGTGCTTTGGTGTGACTCTTATGCTTGATCCAAAGCTTGTTGCTGAGGCTATGTCAGCAATTGCTGCCAGTACAAACGTGCCTGTCAGTGTCAAATGTCGAATTGGTGTGGATGATCATGATTCTTATGATGAGCTATGTGGCTTCATATTCAAGGTGTCTTCTCAATCACCGACTAAGCATTTCATAATTCACTCAAGGAAGGCACTGCTCAATGGCATTAGCCCAGCTGAAAATAGGAGTATTCCTCCGCTAAAATATGAATACTTTTATGGCCTCTTACGTGACTTTCCTGATTTAACATTTACAATAAATGGTGGCATTACTAGTGTTGATGAGGTCAATGCAGCCCGAGAAGCTGGGGCTCATGGTGTTATGGTTGGACGTGCAGCATACAATAACCCTTGGCATATTCTGGGACATGTTGATACTGCAATTTACGGTGCACCAAGTTGTGGTCTTACACGTCGGCAGGTTCATTTAGACAATGATTGGCTTTCCATGGATTCATCTGCACCGATTCTTTCACATTACTCAGAGTTTACTATTTTTTGTTTTGATTATTTATTTCTCATTTTATTAAGGTCCTTGAGAAATATCTAG 1095 0.4146 MMKFAGYSLAVSFSPITISSRVYRNSCRFPLGIVSRRNFRSSRFFSVKEQSHDKPGALAKHYLPPWFSVAPMMDWTDHHYRTLARLISKHAWLYTEMYAAETIVHQKDNLDRFLAFSPEQHPIVLQIGGSNIENLAKATELANAYCYDEINLNCGCPSPRVAGHGCFGVTLMLDPKLVAEAMSAIAASTNVPVSVKCRIGVDDHDSYDELCGFIFKVSSQSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGITSVDEVNAAREAGAHGVMVGRAAYNNPWHILGHVDTAIYGAPSCGLTRRQVHLDNDWLSMDSSAPILSHYSEFTIFCFDYLFLILLRSLRNI. 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00174 364 SUPERFAMILY FMN-linked oxidoreductases 66 306 - -
Seca6g00174 364 FunFam tRNA-dihydrouridine(20/20a) synthase 64 311 - -
Seca6g00174 364 Pfam Dihydrouridine synthase (Dus) 69 308 IPR035587 -
Seca6g00174 364 Gene3D Aldolase class I 63 305 IPR013785 -
Seca6g00174 364 PANTHER FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN 60 323 IPR004653 GO:0002943|GO:0017150
Seca6g00174 364 CDD DUS_like_FMN 67 300 IPR035587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00174 Seca-Chr6 4395385 4401768 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00174 K05539 - gmx:100779457 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00174 6 4395385 4401768 Seca6g00174 6 4395385 4401768 ECH