Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00171 ATGGCGATGGAGGCTGATAATTGGAGTTCTGAAACCAACTGGACCATTGCCTCCGGCTCTCTCCGTAACTGCCTAACTTTCCAATCCTCTCTCTCTTTCTCCGACGACGATGGACCTTCCACCTCAAACTCCTCACCCCTTATTCTTCATTCGCCTTCACTAGATTCTGCTCCTTGCGAGATCAAGATTAATTTTGCGGAGAAACACGAGCTCAGACAAGTCTACGTTCGAAGCACGGCTCGAGTGTACGAGATTTACTGTGCACCCGACTTGCAGAGCAACAACGAGTATCTCTGCACAGTTCGCTGCGGTGCTGCTGTTAGAGATGGTGAAGTTCTTCGTTCTCCTAGTACTCAAGAAATCGCTTCTTTGCCTAATAAAGATTTGGGTGAAGAAAATATAAAAAATGAAGATGATTGGGTTGAAGTGAAAGTTGTTGATACTCCTCCGCAAACAAAGCCCTACATCGATTCAACCAGAACCACTCAGGATCTATTTGAGGCTACGGCTGAGATTAATGACACAGATCCTTGTATTTCTGTTACACTTCGTCTACTCTCGCTTCAGAGTAAAGGCTGCGTTTATGTTGATGAGATTTATGTGTTTGGTGATCCTGTTGATTCAGAAAGCCGAGAAAGCTGTAGTGAAAACTCATCTGGGCCATCTGGCAATTCTCTCATGGCTATGTTTCTTCCAACTTTAATGCAGTTTTCTAAGACAACTGGTCTCAACCATCTAAATGCTGTTAGAAAGGAAAAGCAATTTGTTTCGAAGGATGATTTGGAGGAAACCCCCCACCCTAGTGATTCTGTAATTAAAACGCAGCTGGAAGGAAAAGCTGGCATAACTGATCCTCAAGAAGTGGAGTTGAGAGAGGTGAAAGGAGGTTGGGTGGGTGCATCCCAGCCGGACACAAGTGCTTCTAAACCCTCACAACCTGCTCAAATGGATGGCAATTGCAGTGTTGTACCCTCAAAAATTGCTGAAATGGAGAACAATCATAGTGCTGTCTCCTCACAAGCTGCTGCTGTTAGTGGGAGCAATCAAGGTGTTTTTTCAGGTGCCAATGTTGAAAGGGCCCTGGAACAGCTTGTATCACGAATGGACAGGTTAGAAGAAATCTGTTTGGGCTTTCAAGAGAAAATGGTAATGCCCGTGAACAGCATTGAGGCAAGACTCCAGCAAGTTGAGCAGCAACTTGATATACTGACTAAGAAATTGCAGAATTCTGCTTTGCCATCATGTTATAGAATTTCTGCTCCTGATGCTTCTTGTATTGAATCCGATGCCAACTCCTGTGACAATTGTCTCGGTGATACTGTCGCAAGGGAAATTCAATCAGATAAGAAATATTTACATACAGAGGTACTAAATGCCTCTCCTCATGATATGTCTGATTCAGAAAATTATACTCAATTGCTCCCAGCTCTTGTAGTCACAGCTCCCGAGTTTCCTGATGGTGAGGATGAAGAAGATAATGCATCAAGACAAGAAATGAATTCTTCAACTGATAAAGGAAAGCAGTCAATCGATGATGCTCTATCTTCTGCATTAGCTAATTTTTTATCTTCTCTGTCTTTAGAGTCTTCGAAGTATACTAAAAGTCTAATTAAAGCCCCTGAGTTTTCAAATGAAGACGATGATGACCATGAGAGTAATGATGAGACAGCAAAAAATGACTCCGATCATCTCACAGTCAGAGAGAAATTTAATCATATCCAAGTGTTGGCTTCATCCAATATTTCTTTGGAAAGTGGAGAGAAGGCAAATGGAGATTCTAATGATAAACATGCTGAAAAGACTGCCCAGGAAGCTGAAGAACATGGCCAATTTTGCAGTAGAGAAGGAGATCAAGACGAGGAGTGTGTTAAAGCCAGTATTTTAGCTGAACATAATTCAAGAACAGGTTTTAATGACAAAGTTGAAGAAGACAAAAATGGAAAAATCAATGGTCAGAAAAGTGATGGTTTGTCATCCAATATGAGTGACATTTCAAATGAGTTGCTTGACAATCAGGCCCCAGCTGGTTATAGTATCACTCAGGAAGGACCATCTGCAAGGACTGAGGTTACAGTTGCAACGGAGGTCCCCAAAAAAACCTTCCATGAAAACATTATAGAGAATGTTCTTGGATTTTCACTTTCTTCCTCTGCAGTAGATTTTGAAGTCCCACTGTTGGATGTGAAATTCATTTCTCAGAGAAGTCCTGTTACAGAGGGTTTCCTTGAAGCCCTTGTGATTGAGACACCAGAGACCAGTGCAAGAGATCTATCTATCCAGGAAAGCAGTGGTGAACTTTTCGTTAAGGAACAATTGAGAGGCAATGGTGATCTCTCAGGTGAGGAGCAGTCTAACTTGATTTCAGTAGACGATGGGGAACTGGTGAATCCAGCTAGCGAAAACCATTTTGCTCTAAATGAAGACTTGTGTACATCTAAATCTGCACCCGTGAACATCGAGGGTGATAATTTGCCAGAGGATCAAATATCTACAAGTCTCATATGA 2505 0.4212 MAMEADNWSSETNWTIASGSLRNCLTFQSSLSFSDDDGPSTSNSSPLILHSPSLDSAPCEIKINFAEKHELRQVYVRSTARVYEIYCAPDLQSNNEYLCTVRCGAAVRDGEVLRSPSTQEIASLPNKDLGEENIKNEDDWVEVKVVDTPPQTKPYIDSTRTTQDLFEATAEINDTDPCISVTLRLLSLQSKGCVYVDEIYVFGDPVDSESRESCSENSSGPSGNSLMAMFLPTLMQFSKTTGLNHLNAVRKEKQFVSKDDLEETPHPSDSVIKTQLEGKAGITDPQEVELREVKGGWVGASQPDTSASKPSQPAQMDGNCSVVPSKIAEMENNHSAVSSQAAAVSGSNQGVFSGANVERALEQLVSRMDRLEEICLGFQEKMVMPVNSIEARLQQVEQQLDILTKKLQNSALPSCYRISAPDASCIESDANSCDNCLGDTVAREIQSDKKYLHTEVLNASPHDMSDSENYTQLLPALVVTAPEFPDGEDEEDNASRQEMNSSTDKGKQSIDDALSSALANFLSSLSLESSKYTKSLIKAPEFSNEDDDDHESNDETAKNDSDHLTVREKFNHIQVLASSNISLESGEKANGDSNDKHAEKTAQEAEEHGQFCSREGDQDEECVKASILAEHNSRTGFNDKVEEDKNGKINGQKSDGLSSNMSDISNELLDNQAPAGYSITQEGPSARTEVTVATEVPKKTFHENIIENVLGFSLSSSAVDFEVPLLDVKFISQRSPVTEGFLEALVIETPETSARDLSIQESSGELFVKEQLRGNGDLSGEEQSNLISVDDGELVNPASENHFALNEDLCTSKSAPVNIEGDNLPEDQISTSLI. 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00171 834 Coils Coil 354 381 - -
Seca6g00171 834 MobiDBLite consensus disorder prediction 589 616 - -
Seca6g00171 834 PANTHER 40S RIBOSOMAL PROTEIN S27 5 825 - -
Seca6g00171 834 MobiDBLite consensus disorder prediction 815 834 - -
Seca6g00171 834 MobiDBLite consensus disorder prediction 637 659 - -
Seca6g00171 834 MobiDBLite consensus disorder prediction 301 318 - -
Seca6g00171 834 MobiDBLite consensus disorder prediction 483 508 - -
Seca6g00171 834 MobiDBLite consensus disorder prediction 298 318 - -
Seca6g00171 834 MobiDBLite consensus disorder prediction 581 616 - -
Seca6g00171 834 MobiDBLite consensus disorder prediction 542 566 - -
Seca6g00171 834 Coils Coil 386 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00171 Seca-Chr6 4330228 4333419 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00171 - - gmx:100810497 977.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00171 6 4330228 4333419 Seca6g00171 6 4330228 4333419 ECH