Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00163 ATGGGTGTTTTGGGTTTTTTGTTGGCATTAGCTTTGGTTCTGAATGTGGCTGTGCTGAGTAATGGAGGCAAAACTAGCCTCTTCGTTAGGAAAGTCGAGAAGACTGTGGATATGCCACTTGATAGCGATGTCTTTGCTGTCCCTTCTGGTTATAATGCTCCTCAGCAGGTTCATATAACACAAGGTGACCTTGAGGGGAAAGCAGTGATTGTGTCATGGGTGACACAGAATGAACCAGGGTCAAGCCAAGTGCATTACTGGAGTGAGAACAGCAAGGAAAAGAAGACAGCTGAAGGAAAAATGGTTACTTATAGATTCTTCAATTACACATCTGGCTTTATTCATCATACCGCCATTAGGAATTTGGAGCACAACACCAAATATTACTATGAGGTTGGAATTGGGAACACAACAAGGGAGTTTTGGTTCATAACTCCTCCTGAAGTTGGTCGTGATGTGCCATACACTTTTGGTCTCATAGGGGATCTTGGTCAGAGTTTTGATTCAAATAAGACACTTACTCACTATGAAAGGAACCCTAGAAAAGGACAAACTGTGCTGTTTGTTGGAGACCTCTCTTATGCAGATAACTACCCAAATCATGATAACGTTAGGTGGGATACTTGGGGAAGATTTGTAGAAAGGAGTACTGCTTATCAACCATGGATTTGGACTGCAGGAAACCATGAAATTGATTTTGTTCCAGAAATTGGTGAAACCGAACCTTTCAAGCCTTATACCAACCGTTATCATGTTCCTTATAAAGCATCTGGGAGTACTGCACCCTTTTGGTATTCTATCAAGAGAGCTTCAGCATACATCATTGTCTTGGCCTCATATTCAGCATATGGAAAATATACACCCCAATACAAATGGCTTGAAGAAGAGCTACCAAAGGTTAACAGGACAGAGACTCCATGGTTGATTGTTCTCATGCATTCACCTTGGTATAATAGCTACAACTATCATTACATGGAAGGGGAAACAATGAGAGTAATGTATGAGCCCTGGTTTGTTAAGTACAAGGTTGATGTTGTGTTTGCTGGCCATGTTCATGCCTATGAAAGATCTGAGCGTGTATCCAATGTTGCATATAATGTTGTAAATGGTCTTTGCACTCCTGTAAAAGACCAATCAGCTCCTGTATATATAACCATTGGAGATGGAGGAAACCTTGAAGGCTTAGCAACCAACATTACAGAACCACAGCCAGAGTACTCTGCATTCAGAGAGGCCAGCTTTGGACATGCCATATTTGACATAAAGAACAGAACACATGCTCACTATAGCTGGCACCGAAATCAAGATGGATATGCTGTGGAGGCTGATTCCCTCTGGTTTTTCAACAGATTCTGGCACCCTGTTGATGATTCCACAACACACGTTTCACATTAA 1395 0.4172 MGVLGFLLALALVLNVAVLSNGGKTSLFVRKVEKTVDMPLDSDVFAVPSGYNAPQQVHITQGDLEGKAVIVSWVTQNEPGSSQVHYWSENSKEKKTAEGKMVTYRFFNYTSGFIHHTAIRNLEHNTKYYYEVGIGNTTREFWFITPPEVGRDVPYTFGLIGDLGQSFDSNKTLTHYERNPRKGQTVLFVGDLSYADNYPNHDNVRWDTWGRFVERSTAYQPWIWTAGNHEIDFVPEIGETEPFKPYTNRYHVPYKASGSTAPFWYSIKRASAYIIVLASYSAYGKYTPQYKWLEEELPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVKYKVDVVFAGHVHAYERSERVSNVAYNVVNGLCTPVKDQSAPVYITIGDGGNLEGLATNITEPQPEYSAFREASFGHAIFDIKNRTHAHYSWHRNQDGYAVEADSLWFFNRFWHPVDDSTTHVSH. 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00163 464 SUPERFAMILY Purple acid phosphatase, N-terminal domain 35 147 IPR008963 GO:0003993|GO:0046872
Seca6g00163 464 Gene3D - 150 459 IPR029052 -
Seca6g00163 464 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 53 149 - -
Seca6g00163 464 Pfam Purple acid Phosphatase, N-terminal domain 54 144 IPR015914 GO:0003993|GO:0046872
Seca6g00163 464 SUPERFAMILY Metallo-dependent phosphatases 152 458 IPR029052 -
Seca6g00163 464 Pfam Calcineurin-like phosphoesterase 156 354 IPR004843 GO:0016787
Seca6g00163 464 CDD MPP_PAPs 152 449 IPR041792 -
Seca6g00163 464 PANTHER ACID PHOSPHATASE RELATED 9 448 IPR039331 GO:0003993
Seca6g00163 464 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 150 458 - -
Seca6g00163 464 Gene3D - 53 149 - -
Seca6g00163 464 Pfam Iron/zinc purple acid phosphatase-like protein C 380 439 IPR025733 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00163 Seca-Chr6 4150942 4154530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00163 112 437 Miscellaneous Gene Families AT1G13900 27.297 7.21e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00163 K22390 - gmx:100815854 884.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00163 6 4150942 4154530 Seca6g00163 6 4150942 4154530 ECH