Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00152 ATGAGGAACAATCGTGTGCGTTTGAACTGTGGCATCACAATGCCCCTCATTGGATTTGGCACTTATTCCTTCCCAAATGATAGGAAGACAACAGAATTTGCTGTCCACAATGCCCTTGAGATGGGGTATAGGCATTTTGATACAGCAAAAATATATGGTTCTGAGCCAGCAGTGGGTAAAGCCATAAATGAGGCAATCTGCATGGGAGAAGTAGAGAGAGAAGACATTTTCTTGACATCTAAACTGTGGGGGAGTGATCACCATGATCCTGTTTCTGCATTGAGACAAACTCTAGAATTACTACTTGAATTGCAAAACAGGAATCTGGGCATGGAATATCTGGACATGTACCTAGTGCACTGGCCTGTCAAGTTGAAGCCATGGGTTAACTACCCTGTGCCTAAGGAAAATGACTTTGAAAAATTGGACCTTGAGACCACATGGGCAGGGATGGAAAAATGCCTAGAGATGGGGTTGTGTAGGTGCATTGGGGTTAGCAATTTCTCTAGCAAGAAGATTGAGTGGCTATTAGATTTTGCTTCTACACCTCCAGCTGTTAACCAGGTTGAAATGCATCCAATGTGGAGACAAGGAAAGCTGAGAGAGACATGTGGAGACCACAAGATCCATGTAAGCGCCTATTCACCACTTGGTGGACCAGGGAATGCATGGGGATCTCAAGCTGTCATTAATCATCCAATCATCCAATCAATTGCCCTTAAACACAAGGCAACTCCAGCACAGGTTGCATTGAGATGGGGGCTATCAAGGGGCTCAAGTGTGATTGTGAAAAGCTTCAATGAAGAAAGAATGAAGGAAAATATGGGATCATTTGATCTGAAATTGGATGATGAAGATATCTTGGAGATCGAGAATTTGGAGGAAATGAAGATTATGAGAGGGGAATTTCACGTTAATGAAACCACAAGTCCCTACAAAACAATTGAAGAACTTTGGGACGATGAAATTTGA 972 0.428 MRNNRVRLNCGITMPLIGFGTYSFPNDRKTTEFAVHNALEMGYRHFDTAKIYGSEPAVGKAINEAICMGEVEREDIFLTSKLWGSDHHDPVSALRQTLELLLELQNRNLGMEYLDMYLVHWPVKLKPWVNYPVPKENDFEKLDLETTWAGMEKCLEMGLCRCIGVSNFSSKKIEWLLDFASTPPAVNQVEMHPMWRQGKLRETCGDHKIHVSAYSPLGGPGNAWGSQAVINHPIIQSIALKHKATPAQVALRWGLSRGSSVIVKSFNEERMKENMGSFDLKLDDEDILEIENLEEMKIMRGEFHVNETTSPYKTIEELWDDEI. 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00152 323 Gene3D - 3 323 IPR036812 -
Seca6g00152 323 FunFam NADPH-dependent codeinone reductase 1-1 3 323 - -
Seca6g00152 323 ProSitePatterns Aldo/keto reductase family signature 2. 151 168 IPR018170 GO:0016491
Seca6g00152 323 Pfam Aldo/keto reductase family 17 294 IPR023210 -
Seca6g00152 323 PRINTS Aldo-keto reductase signature 185 214 IPR020471 GO:0016491
Seca6g00152 323 PRINTS Aldo-keto reductase signature 104 122 IPR020471 GO:0016491
Seca6g00152 323 PRINTS Aldo-keto reductase signature 229 253 IPR020471 GO:0016491
Seca6g00152 323 PRINTS Aldo-keto reductase signature 151 168 IPR020471 GO:0016491
Seca6g00152 323 PRINTS Aldo-keto reductase signature 38 62 IPR020471 GO:0016491
Seca6g00152 323 PANTHER ALDO/KETO REDUCTASE 5 294 - -
Seca6g00152 323 ProSitePatterns Aldo/keto reductase family signature 1. 42 59 IPR018170 GO:0016491
Seca6g00152 323 PIRSF AKR 1 317 IPR020471 GO:0016491
Seca6g00152 323 SUPERFAMILY NAD(P)-linked oxidoreductase 5 293 IPR036812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00152 Seca-Chr6 3796165 3799067 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00152 - K00002 gmx:100786497 577.015