Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00138 ATGTCGAAGGATAAAGACCCTACCAATCTGTCACGTACCTTCAAATACCTATTAGCGACTCAGTTCTTGTCAAGAGGAATTCCATTTATATTCAATACGTGGGTTGTAAGGCATCTTACAGAGGAGGACTATGCGCTGTATGCAGTGCAGTTTCATCTGTTTGTCACATGTGTTTTATTTCTTAGCCGGGAGGGCTTCCGACGAGCTTGCATGCGGATGGACATGAAACGTGATGGCACTTCAATGGAAGAAGATGTTGTGAAGCTAATGAAAGTGGCGTGGATGAGTCTCCCACTTGGAATGTTTATTACAATTGTAGCATGCCTTTTTGTCTTCTGGTGGCAACAAATAAGTTATTTTAGTCCACATGGACAAGCTATCTTGATCAATGGTTGTGCATGCATTTTGGAGCTTTTGGCTGAGCCTTTATATATTCTTTCACAGAACTTGGTCTTGCTTAGATTACGGTTGATGGTTGAGACACTAGCTACTCTCTCACGGTGCTTGACATTGTACTTCCTAATTGTCAAGCAAACTGGAATGGAAAAATCAATCATATTTGCATTATCACAGTCTGCATATGGAGCCGGCTTATTTCTTGGTTATTGGGGCTATCTGGTTATTTTGCGCAAATTCAGATATTCTTACCTTTTCCCATTCAGAGAAGGAAAAATTATTGATTTTGACCAGCAGCTGTCAAAGATGTGTATGCTGTTTACCTTTCAATCCTTTCGAAAGCTGATCCTTCAGGAAGGAGAAAAGATGGTGCTTGTGTGGTTGGATACACCATATAATCAGGCTGTATATGGCCTCGTGGACAAATTAGGTAGCTTAGTGGTGAGACTTGTCTTTTTACCTTTTGAAGAAAGTTCATATGCAACATTTGCAAGGTCTGCTTCAGGACAATACCCAGGAAAAAGCAAGAAATTAGGAAACTGCTTGACAGAGTCCCTTAAGTTAGTTTTGTTGATTGGCCTCGTTTTTATGGCATTTGGTCCAAGTTATTCTTATTCACTCATTAGATTGCTGTATGGAAAAAAATGGAGTGATGGAGAAGCATCAACTGCCCTCCGCTATTATTGCTTTTATGTCATAATGTTGGCTATGAATGGTAATTCACCTTGTCTCTTGTTGTTTAATTTTTAA 1146 0.397 MSKDKDPTNLSRTFKYLLATQFLSRGIPFIFNTWVVRHLTEEDYALYAVQFHLFVTCVLFLSREGFRRACMRMDMKRDGTSMEEDVVKLMKVAWMSLPLGMFITIVACLFVFWWQQISYFSPHGQAILINGCACILELLAEPLYILSQNLVLLRLRLMVETLATLSRCLTLYFLIVKQTGMEKSIIFALSQSAYGAGLFLGYWGYLVILRKFRYSYLFPFREGKIIDFDQQLSKMCMLFTFQSFRKLILQEGEKMVLVWLDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYATFARSASGQYPGKSKKLGNCLTESLKLVLLIGLVFMAFGPSYSYSLIRLLYGKKWSDGEASTALRYYCFYVIMLAMNGNSPCLLLFNF. 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00138 381 Pfam Rft protein 13 372 IPR007594 GO:0006488|GO:0016020
Seca6g00138 381 PANTHER ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED 1 375 IPR007594 GO:0006488|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00138 Seca-Chr6 3551549 3560939 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00138 K06316 - gmx:100817452 662.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00138 6 3551549 3560939 Seca6g00138 6 3551549 3560939 ECH