Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00136 ATGCGGAGAATGTTATACAGCAACTTGCAAAAGAGGATGGAACAGGTCAAAGCCACTTGTGTATTTGCGGAGCAAGAGGTGGAGTATGAACTACGTTTCATCATGGACGTTGTCAACCAGAGTTTGAAATCGGTCAAAGTTCCACAAGGCACTCCAAGGATTGAATTATGGAACACTCCCTTTTATGATGTAAAGGTGCTGCAAAATCTACCTGCATCATACAATGACTTTAAGAAACTTGGACTACCTGTAACTACACCACTTCAGCTGTCAACATTGCCCAGTGCAGAAATGGAACTGGACTGGGGCACTCTTCCTGTATATGATGATATAAAGGAATATATGGCTAGCAACCAATGGAAATTGGGAGGTAATTGGAATTCGATCAAGGAGACATCAGCTGAAACCTTGTTACGCAGAGAAATATTGAAGTCTAGTGAGAGCAGTGAAAGAAGTTATAGCTTTAGACAGATGCAGTCAAGGGAACCAAATGAATCTGTTTTTGTGACACGAAAAGGAAATCTTGTAGGGGGTGGAACAAGTAATGTACTGAATGCGTTGGCTGCATATTTGAGATATTTAGAGGGAACAGCTCGTGATGACTGGCAAGAGGTACATGACAAAGTGCGTGCTTCTGAAAGTCGGAATGGAGCATCATTTATTGGACTCTTCGGTCCCGCCCTATCTCTTGGCATTATATCTAGAAGAAGAGTACATTATGAAGCCATCAAATATGAAAGAGAACGAAATGCAGGATTCTTATCTCCCTTTGGATATTCAGCTGCCACAATTGCAGCAGCAGTTGACGCTGTGTGCTCAAAGGAGTGGTATTGGCTTATGGCTTTGAGAAATCAGATAAAAAATGATGGAGAAGGAGAACACTCAACACGGATATGGAGATGGAATGGTTTTCTTATTCAGTATACAGTTGCTGGTGAAGATGGTCCTGCTGTTCTTCTTGTACATGGTTTTGGTGCCTTCAGCGAGCATTACCGAGACAACATACATGGTTTAGTTGGAGCTGGGAATCGAGTATGGGCTATTACAATGATAGGATTCGGCAAATCAGAAAAGCCAAATATTGTATATACTGAACTCTTATGGGCTGAACTATTGAGAGATTTTATTGTTGATGTTGTGGGTGAACCGGTCCACCTAGTTGGCAATTCGATTGGTGGTTATTTTGTTGCTATTGTTGCTCGCATTTGGAGTGTTTTGATCAAATCCGCTGTCTTGATCAACAGTGCTGGCAATGTCATCCCAAGATATACATTCATACCGTTGTCCAACATTCAGGATAGACAAACTTCAGGGGCTTCCTGGTTGGGTTCTCGCATTCTTCTATTCTACTTGAGGCTAAGAATTCAAGAAATAGTTAAGAAATGTTATCCAACTAGGGTTGAAAGAGCAGATGAGTGGCTCATAAATGAAATGCTAAGAGCAGTATCCTCTACTTCTATAATCTAA 1467 0.4131 MRRMLYSNLQKRMEQVKATCVFAEQEVEYELRFIMDVVNQSLKSVKVPQGTPRIELWNTPFYDVKVLQNLPASYNDFKKLGLPVTTPLQLSTLPSAEMELDWGTLPVYDDIKEYMASNQWKLGGNWNSIKETSAETLLRREILKSSESSERSYSFRQMQSREPNESVFVTRKGNLVGGGTSNVLNALAAYLRYLEGTARDDWQEVHDKVRASESRNGASFIGLFGPALSLGIISRRRVHYEAIKYERERNAGFLSPFGYSAATIAAAVDAVCSKEWYWLMALRNQIKNDGEGEHSTRIWRWNGFLIQYTVAGEDGPAVLLVHGFGAFSEHYRDNIHGLVGAGNRVWAITMIGFGKSEKPNIVYTELLWAELLRDFIVDVVGEPVHLVGNSIGGYFVAIVARIWSVLIKSAVLINSAGNVIPRYTFIPLSNIQDRQTSGASWLGSRILLFYLRLRIQEIVKKCYPTRVERADEWLINEMLRAVSSTSII. 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00136 488 Coils Coil 6 26 - -
Seca6g00136 488 Gene3D alpha/beta hydrolase 290 486 IPR029058 -
Seca6g00136 488 PANTHER DNA PHOTOLYASE 9 482 - -
Seca6g00136 488 Pfam Alpha/beta hydrolase family 318 447 IPR000073 -
Seca6g00136 488 SUPERFAMILY alpha/beta-Hydrolases 295 465 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00136 Seca-Chr6 3486440 3491620 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00136 - - gmx:100813721 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00136 6 3486440 3491620 Seca6g00136 6 3486440 3491620 ECH