Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00133 ATGGATTTGGATCCAAATCAGAACTCTTCAACTCGCCGGAAGGTCAAATTTGCCCCAACGAAGAAACCCAAACCAGTCCAGGCAAAAGCAACCAAGACTGAAGAAGCTGTTGATGGAAATGACGAAGATAGCGCACAGGCTCAAGCTCTCTTGCGTCGGTGGAATGAGAATCTTGCAAGACGAGAGCCTAAAGCTGAAAGAAAATCTAGTGTGCAAGTTGCATTTGGTCCTGGAGGTTCATCACTTCCTCTGAGAACATTTGGCATTGGTAAGGGTGTAGATAGTAGCAAAAACAGTGGCTCAGCATCCAAATATTTCGCTAATGAGCAAAATGGTTTAACACGTTCTTCAACTGCTATTGAGGATCAAAATGATACTAACATGATAGATGAGACTGATGATACAACTAAAGCATCAGCCAGGAAAATCAAAGGGAAGTACAAGGAGCCATGGGATTATGACCACTCTTACTATCCTACTACTCTTCCTCTGAGGAAGCCCTATTCTGGAAATCCAGAAATTCTTGATGAGAAAGAATTTGGGGAGGCTGCCGCTAGTGTGGAGTATGATGAGAATACTGTTAATCCTGCTGCAGAACTCGAGCTCTTGGAGAAGAGTGAGCAACAAAGTATGCTTTTCTTTCAGCTTCCTGCTCTGCCTTTTGTCAAGCAATCAGTGAGTAGGAAGGGGAAGGAGAAAATTGGTACATCAACAGTATCAGGAGAGCCAAACAAGGGAAGTGCCTTGGAAGAGTTGCCAAAGGGATATGCGGGCAAAATGCTGGTATACAAAAGTGGAGCAATCAAATTAAAACTAGGAGAAACCCTGTTCGATGTAAGTCCTATCCCTCTTGAAATTAACAATTGGCTTCATACCATGCTTACCCACACCCACCAATTTGTGATTTGCTCATCTTCTTACTTACTGTTACTAAATCTACTAAATTGA 948 0.4262 MDLDPNQNSSTRRKVKFAPTKKPKPVQAKATKTEEAVDGNDEDSAQAQALLRRWNENLARREPKAERKSSVQVAFGPGGSSLPLRTFGIGKGVDSSKNSGSASKYFANEQNGLTRSSTAIEDQNDTNMIDETDDTTKASARKIKGKYKEPWDYDHSYYPTTLPLRKPYSGNPEILDEKEFGEAAASVEYDENTVNPAAELELLEKSEQQSMLFFQLPALPFVKQSVSRKGKEKIGTSTVSGEPNKGSALEELPKGYAGKMLVYKSGAIKLKLGETLFDVSPIPLEINNWLHTMLTHTHQFVICSSSYLLLLNLLN. 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00133 315 PANTHER DNA-DIRECTED RNA POLYMERASE III 7 281 IPR007811 GO:0003677|GO:0005666|GO:0006383
Seca6g00133 315 Pfam RNA polymerase III RPC4 229 281 IPR007811 GO:0003677|GO:0005666|GO:0006383
Seca6g00133 315 MobiDBLite consensus disorder prediction 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00133 Seca-Chr6 3477820 3482090 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00133 K03026 - gmx:100787575 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00133 6 3477820 3482090 Seca6g00133 6 3477820 3482090 ECH