Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00128 ATGGAGGCCACTCTTCAGTCCACATATCCAATAGCCCATGAACCTGATGATGATAATATTCTACGAACCCGCACTTATGACGTCAGCATCACGTATGATAAGTATTATCAAACACCTCGAGTATGGCTTACTGGGTATGATGAGTCAAGAATGCTATTGCAACCAGAACTTGTCCTTGAAGATGTTAGTCAAGACCATGCACGAAAAACGGTAACAATCGAGAACCACCCTCACTTGCCTGGGAAGCATGCATCTATTCATCCATGTCGACATGGAGCAGTGATGAAGAAAATCATTGATGTGTTGATGTCACGTGGAGTTGAGCCTGAAGTTGACAAGTACCTATTTTTATTCCTGAAATTTATGGCCTCTGTCATTCCAACAATTGAGTATGATTACACCATGGACTTTGATCTCGGTAGCTCCAGCAATTGA 435 0.423 MEATLQSTYPIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKTVTIENHPHLPGKHASIHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSSN. 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00128 144 Pfam Autophagocytosis associated protein, active-site domain 17 133 IPR007135 GO:0019787
Seca6g00128 144 FunFam Autophagy-related protein 3 2 129 - -
Seca6g00128 144 Gene3D - 4 129 - -
Seca6g00128 144 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 12 138 IPR046962 GO:0019776
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00128 Seca-Chr6 3409166 3413048 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00128 K08343 - gmx:100787410 288.5