Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00124 ATGGAGAGTGCTTTTGCGAGCGCTTCTGCGATTACAGACCAGAGGCAAAAGATAGAGCAGTATAAACACATCCTTACTGCTGTCATTTCATCCAATGACATCGTTCAGGCTAGGAGATTCATAGATCACATGTTATCAGATGATGTTCCTCTAGTAGTGTCACGGCAGCTTCTGCAGACTTTTGCCGAAGAGTTGGGAAGATTGGAGCCTGAGACACAGAAAGAGATTGCCCATTACACTCTAGCCCAGATTCAGCCTCGTGTTGTGTCATTTGAAGAACAGGTTTTAGTTATTAGAGAGAAACTTGCTGAGCTTTATGAATCCGAGGAGCAATGGTCAAAAGCAGCTCAGATGCTCAGTGGTATTGACCTAGATTCAGGAATGAGGGTGATCGATGATACATTCAGGTTGTCAAAGTGTGTCCAAATTGCTTGTTTATACCTTGAGGATGATGACGCTGTCAATGCTGAAGCTTTCATCAATAAAGCATCATTCTTGGTTAGCAATAGTCAGCATGAAGTACTGAATTTAAAATACAAGGTTTGCTATGCAAGGATCTTAGATCTGAAGAGGAAGTTCTTGGAAGCAGCCTTACGATATTATGATATATCTCAGATTGAAAAAAGGCAAATAGGAGACGAGGAGATTAATGAGGAAGCACTTGAGCAAGCTTTATCTGCTGCTGTTACATGCACAATATTGGCAGCTGCAGGACCTCAACGTTCCCGTGTTCTTGCCACATTGTACAAGGATGAAAGGTGTTCAAAGTTGAAGATCTATCCTATACTGCAAAAGGTGTATTTGGAGAGAATTCTTAGAAAGCCTGAAATTGATGCTTTTGCAGAAGAATTGAAACCACATCAGAAAGCTCTTCTTCCAGACAATTTCACTGTGCTGGACCGTGCTATGATTGAGCATAATCTTCTGAGTGCAAGCAAACTTTATACTAATATCAGCTTTGATGAGTTGGGCACGCTGTTGGGGATCCCACCTCACAAGGCTGAGAAGATAGCATCAAGAATGATTTATGAGGATAGGATGAGGGGATCTATTGATCAGGTATAA 1065 0.416 MESAFASASAITDQRQKIEQYKHILTAVISSNDIVQARRFIDHMLSDDVPLVVSRQLLQTFAEELGRLEPETQKEIAHYTLAQIQPRVVSFEEQVLVIREKLAELYESEEQWSKAAQMLSGIDLDSGMRVIDDTFRLSKCVQIACLYLEDDDAVNAEAFINKASFLVSNSQHEVLNLKYKVCYARILDLKRKFLEAALRYYDISQIEKRQIGDEEINEEALEQALSAAVTCTILAAAGPQRSRVLATLYKDERCSKLKIYPILQKVYLERILRKPEIDAFAEELKPHQKALLPDNFTVLDRAMIEHNLLSASKLYTNISFDELGTLLGIPPHKAEKIASRMIYEDRMRGSIDQV. 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00124 354 SUPERFAMILY "Winged helix" DNA-binding domain 292 354 IPR036390 -
Seca6g00124 354 Pfam PCI domain 268 354 IPR000717 -
Seca6g00124 354 FunFam COP9 signalosome complex subunit 4 289 354 - -
Seca6g00124 354 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 4 354 IPR040134 -
Seca6g00124 354 ProSiteProfiles PCI domain profile. 192 354 IPR000717 -
Seca6g00124 354 Gene3D - 291 354 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00124 Seca-Chr6 3370611 3376287 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00124 K12178 - gmx:100819593 666.381