Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00123 ATGAGCCGATTCAGGCGATTTGAGCTCATCGAAGAACCCTTCTGCTACTACTCCTCACCACTCTTCTTCACCGAAACCCTAAATTTCCCTTCCTTCGTCGAAGATTCCCTCGACCTCGCCCTCCTCCCGAGTCCCTTCGATGCTGTGACGGATCTCGTGTGCATTGATCGCACGCCGTCGATTTCGTACCAGCGAGTTCAGCGAGTCCAGAGGAGGCAACTCGGGACAGAGTTATGCTTGCAGAGCCTGTGCGACCGGGTCTCTGAGTTAGAGTCGCGATTCGATCGTCTCCTCCTCGGCGGGAAGATCGGAGGCGATCGGAAGTACACGTGGACGACGGAGATCAATGGACCGGAGGAGAATGGGTTTGATAGGAAGTACAAATGGGTTGCGGAGATCGTCGAGGAAGAGAAGAAGAAGACGAACAAGTTGAAGAACGTCAAGTGGACGGCTGAGATCAAGGGAAAAGGACAGGACAGTGGGAGCTCAAGGAAGTATACCTTTGAGGTGGAAAGTGAGAAGGAAAAGGAGAAGGAGAAAGTGAAGGAAAAGGTGAAGGAGAAGGAGAAGAAGGAGAAAAAGAAAGGAAGTGGATTGCGCATTGTGGAGATTGAAGAACCAACTGGGCATAGAGATGTGGTTTTAAGACAGCTAACTCCCTTGTGGATGAAGGCATTTGCAAAGAGGTTTGGAGCTGTTCGAAACGAGAGAGGCAAAAAAAAGGAATTATCAACTCAAGATGCTGCATTGGCGATCCAGATCAGCTTTAGAGCATATTTGATCCGTAGGTCAAAGGCTCTTCGTGCCCTTAGAGAACTGGCTATTGCAAAATCTAAGTTAAAGGAAATCAGAGCTCAGTTCAATAATTTTTCCTACCGACGCCATGTAGCCCGTGATGCAGAGGAACGCCAGAGGTTTACTGAGAAAATCATTGTCTTGCTCCTCACTGTTGATGCCATTGAGGGAGCTGATCTGATGGTAAGATCTGCGAAGAGGTCAATGGTGGATGAGCTGGAAGCAATGCTTGATGTGGTGGATCCCCAGCCTGCTGGAAAATCACTCTCCTTCAGGAGAAGGACATTTGATATGCCTGATGGAGTCATCCGGAAGGAGATTGAAGAAGGCGTTGCACAGGTTGTGCGAATGCTTGATGAGGCAGAGAATAGCAGCACCTCTTTTTAA 1182 0.489 MSRFRRFELIEEPFCYYSSPLFFTETLNFPSFVEDSLDLALLPSPFDAVTDLVCIDRTPSISYQRVQRVQRRQLGTELCLQSLCDRVSELESRFDRLLLGGKIGGDRKYTWTTEINGPEENGFDRKYKWVAEIVEEEKKKTNKLKNVKWTAEIKGKGQDSGSSRKYTFEVESEKEKEKEKVKEKVKEKEKKEKKKGSGLRIVEIEEPTGHRDVVLRQLTPLWMKAFAKRFGAVRNERGKKKELSTQDAALAIQISFRAYLIRRSKALRALRELAIAKSKLKEIRAQFNNFSYRRHVARDAEERQRFTEKIIVLLLTVDAIEGADLMVRSAKRSMVDELEAMLDVVDPQPAGKSLSFRRRTFDMPDGVIRKEIEEGVAQVVRMLDEAENSSTSF. 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00123 393 Coils Coil 266 286 - -
Seca6g00123 393 Coils Coil 369 389 - -
Seca6g00123 393 Coils Coil 171 194 - -
Seca6g00123 393 ProSiteProfiles IQ motif profile. 245 274 IPR000048 GO:0005515
Seca6g00123 393 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 22 349 IPR040400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00123 Seca-Chr6 3351073 3355179 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00123 - - adu:107495585 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00123 6 3351073 3355179 Seca6g00123 6 3351073 3355179 ECH