LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca6g00102	ATGTGGAGACGCGCAACCACTACTTTGAAATCATCCCTTTACCTTCACATGCACTTGATGCAGGAAGTTCCTAAACACAATGTTTGTCCTTGCCATAGATTTACCACAGGATTGCCCTTGCACCTGCAGCAGGAAAAGGATGGGATTTGCCCCAAACATATAGCTCCGATTATAACTTTTGTTTTAGGGGGCCCTGGTAGTGGAAAAGGTACACAATGTGCAAAAATTGTTGATACTTTTGGATTTAAGCATCTGAGTGCTGGAGACCTGTTGAGAAAAGAGATGGTTTCTGATAGTAAATATGGCTCAATGATTCTGAATACAATTAGCGAAGGAAAAATTGTTCCATCAGAAGTGACTGTCAAATTGATTCTAAGAGAGATGGAATCTAGTGACAATCATAAGTTTCTTATTGATGGTTTCCCTAGAAGCGAGGAGAACCGCATAGCTTTTGAACAAATTGTAAGTTTGACTTTTAACTTTCTATCACTTAAATTTGGGTTGAAGGAAGTTATGTCTGTCCTCCTTGGAACTCCTCTTTCTAATGCTGATGAATTGATACAGTATTGA	570	0.3895	MWRRATTTLKSSLYLHMHLMQEVPKHNVCPCHRFTTGLPLHLQQEKDGICPKHIAPIITFVLGGPGSGKGTQCAKIVDTFGFKHLSAGDLLRKEMVSDSKYGSMILNTISEGKIVPSEVTVKLILREMESSDNHKFLIDGFPRSEENRIAFEQIVSLTFNFLSLKFGLKEVMSVLLGTPLSNADELIQY.	190

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca6g00102	189	Gene3D	-	40	181	IPR027417	-
	Seca6g00102	189	Pfam	Adenylate kinase	61	156	-	-
	Seca6g00102	189	ProSitePatterns	Adenylate kinase signature.	136	147	IPR033690	-
	Seca6g00102	189	PANTHER	NUCLEOTIDE KINASE	47	159	IPR000850	GO:0005524\|GO:0006139\|GO:0019205
	Seca6g00102	189	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	57	155	IPR027417	-
	Seca6g00102	189	CDD	ADK	60	155	IPR000850	GO:0005524\|GO:0006139\|GO:0019205
	Seca6g00102	189	PRINTS	Adenylate kinase signature	88	102	IPR000850	GO:0005524\|GO:0006139\|GO:0019205
	Seca6g00102	189	PRINTS	Adenylate kinase signature	136	152	IPR000850	GO:0005524\|GO:0006139\|GO:0019205
	Seca6g00102	189	PRINTS	Adenylate kinase signature	60	73	IPR000850	GO:0005524\|GO:0006139\|GO:0019205

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca6g00102	Seca-Chr6	2718109	2722959	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca6g00102	K13800		-	gmx:100777369	219.935

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Seca6g00102	6	2718109	2722959	Seca6g00102	6	2718109	2722959	ECH