Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00092 ATGAATAGCAGTGTAGATGTTGAGATTGTGATTGTGGGAGGTGGTATATGTGGCCTTGCAACTGCCCTCGCCCTTCATAGGAAGAGAATTAGATGTTTGGTGTTGGAAAGATCAGAGAAATTGCGAGCTACAGGAGCAGCTATAATTGTGCAGGCTAATGGTTGGCGTGCACTTGACCAACTTGGTGTTGCTTCCACACTCAGACAAACTGCCATTCAAATACAAGGGGGAAAATTCATACCGCTCAGTGAGGCTGAGTCAAAGGAAATACCATTTGGACTTAATCAAGAATTTCGTTGTTTAAAGCGTACTGATCTTATGAATGCCATAGCCAATAGTTTGCCAGAAGGAACTATACGTACAAGTTGTCAAGTGGTATCCATTGAATTGGATCCTATAACACACTATCCACAACTTATGCTTAGCAATGGAAGTCACCTTCGAGCCAAGGTTGTTATTGGATGTGATGGCGTGAATTCTATCACTGCAAATATAGTTGGGTTACACCCAACAAAACTCTTGCTTTTCTCTACATGTGTTGCACGAGGCTTCACCAATTATCCGAATGGTCATCAATTTGCTAGTGAGTTTGTTGTGATGAGCAGAGGCAATGTCCAACTCGGAAGAATCCCGGTGACAGACAAACTCGTTTATTGGTTTGTCACAAGGCTAAGGTCTTCTCAAGATTCAATGATTTCAAGAGACCAAGTTCTTATTAGACAATCTTTGATGGAATCAATGAAAGGTTTCTCAGTACACGCTATGGACATGATACAAAATTGTGAGTTGAACTCCTTGCATCTCACTGACTTGAGGTATCGTCCACCATGGGAGTTATTTCTTAACAAGTTTAGGAAAGGCACGGTAACAGTAGCTGGTGATGCAATGCATGTCACAGGTCCATTTATTGCACAGGGTGGCTCTGCCTCCTTAGAAGATGCAGTTGTTCTTGCTAGATGCCTAGCACAAAAAATGAATAATAGTAGTTCTAAGAACATGAGAAAAGAAGGAAAGATCATGGAGGAAGCATTCGATCAATATGTGAAAGAAAGGAAGATGAGAATCTTGCGGCTCTCTTTGCATTCTTTCCTTATTGGGAAGAAGCTTGATACAAAATCATTGATAGTGAGATTTGTTATCCTTGCAATCATGGTTGTGTTGTTTAGAGACCCAAATGGGCACACCTACTATGATTGTGGAACTCTATAG 1209 0.4111 MNSSVDVEIVIVGGGICGLATALALHRKRIRCLVLERSEKLRATGAAIIVQANGWRALDQLGVASTLRQTAIQIQGGKFIPLSEAESKEIPFGLNQEFRCLKRTDLMNAIANSLPEGTIRTSCQVVSIELDPITHYPQLMLSNGSHLRAKVVIGCDGVNSITANIVGLHPTKLLLFSTCVARGFTNYPNGHQFASEFVVMSRGNVQLGRIPVTDKLVYWFVTRLRSSQDSMISRDQVLIRQSLMESMKGFSVHAMDMIQNCELNSLHLTDLRYRPPWELFLNKFRKGTVTVAGDAMHVTGPFIAQGGSASLEDAVVLARCLAQKMNNSSSKNMRKEGKIMEEAFDQYVKERKMRILRLSLHSFLIGKKLDTKSLIVRFVILAIMVVLFRDPNGHTYYDCGTL. 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00092 402 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 - -
Seca6g00092 402 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 - -
Seca6g00092 402 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 - -
Seca6g00092 402 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 - -
Seca6g00092 402 SUPERFAMILY FAD/NAD(P)-binding domain 7 389 IPR036188 -
Seca6g00092 402 Gene3D - 8 374 IPR036188 -
Seca6g00092 402 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 8 402 IPR044560 -
Seca6g00092 402 Pfam FAD binding domain 6 330 IPR002938 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00092 Seca-Chr6 2406048 2408692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00092 1 366 Miscellaneous Gene Families AT5G05320 37.135 2.20e-77 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00092 - - mtr:25491818 607.06