Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00089 ATGTGGCCAGGGAAACTTGGTGAGATCAAAAAGATGAGGGGAAAGCCAGCTTCAGGAAAGACCATTTTTTTCCTATGCATTGCATGTTTTCTTGCTGGAACACTCTTCACTGGTCAAATGTGGACTCGCCCCTCCAACCATGAAAATTCAGCTGTAACCATAGCCAGACATGATTGTGATCATAAGCGAAAATTGATTGAAGGCAGACCTGCTGATATAATGGAGGAAGTCACAAAGACCCATCAAGCTATCAAGTCTCTTGATAAGGCTGTTTCAACATTGGAAATGGAATTGACAGCAACTCGGACTAGCCAAACTGGTGGGCAGCACATGCGGCAACATGGTTCTAACCACAGTGTGCAGAAAGCTTTTGTGGTGATTGGTATCAACACAGCCTTTAGCAGCAAAAGGAGAAGAGACTCAATACGCGAAACATGGTTACCAAAAGGGAATAAACTTAAGGAATTAGAGAAAGAAAAGGGCATTGTGATAAGGTTCATGATAGGGCATAGCACCACACCAGGTGGCCTTCTTGATAAAGCAATTGATGCAGAAGAGGCAGAACACAAGGACTTCCTCAGGTTAGATCACATTGAGGGATACCATGAGCTATCTTCTAAGACACGCCTCTATTTCTCAACTGTTACTTCTATGTGGGATGCTGATTTCTATGTCAAGGTAGATGATGACATCCATTTAAATCTAGGTATGCTGGTGAATACACTTGCTAAGTACCGATCAAGACCCAGGATTTATATTGGTTGCATGAAATCTGGTCCAGTTCTATATCAAAAAGGGGTAAAGTATCATGAGGCTGAGCACTGGAAGTTTGGAGAAGAAGGGAACAAGTATTTTAGGCATGCCACTGGCCAAATATATGCTATCTCCAAGGACCTTGCTACCTATATATCCATCAATTGGCCCATATTACACAGATATGCAAATGAGGACGTATCTTTGGGTTCATGGTTATTGGGCCTAGAAGTTGAACATGTTGATGAACGCTCTATGTGTTGCGGGACCCCTCCAGATTGTGATTGGAAGGCGAGGACAGGAAACATGTGCGTGGCATCTTTTGATTGGTCATGCAGTGGTATCTGTAAGTCCGTGGAGAGAATGAAGGAGATACACAAAGCTTGTGGGGAGGGAGATGGATCTGTTTGGAACGTTGAACTTTAA 1179 0.4326 MWPGKLGEIKKMRGKPASGKTIFFLCIACFLAGTLFTGQMWTRPSNHENSAVTIARHDCDHKRKLIEGRPADIMEEVTKTHQAIKSLDKAVSTLEMELTATRTSQTGGQHMRQHGSNHSVQKAFVVIGINTAFSSKRRRDSIRETWLPKGNKLKELEKEKGIVIRFMIGHSTTPGGLLDKAIDAEEAEHKDFLRLDHIEGYHELSSKTRLYFSTVTSMWDADFYVKVDDDIHLNLGMLVNTLAKYRSRPRIYIGCMKSGPVLYQKGVKYHEAEHWKFGEEGNKYFRHATGQIYAISKDLATYISINWPILHRYANEDVSLGSWLLGLEVEHVDERSMCCGTPPDCDWKARTGNMCVASFDWSCSGICKSVERMKEIHKACGEGDGSVWNVEL. 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00089 392 Gene3D - 113 339 - -
Seca6g00089 392 FunFam Hexosyltransferase 117 338 - -
Seca6g00089 392 Pfam Domain of unknown function (DUF4094) 18 103 IPR025298 -
Seca6g00089 392 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 88 336 IPR002659 GO:0006486|GO:0016020|GO:0016758
Seca6g00089 392 Pfam Galactosyltransferase 137 333 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00089 Seca-Chr6 2326850 2333185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00089 11 392 Glycosyltransferase AT1G77810 61.125 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00089 K20855 - gmx:100803654 696.427
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00089 6 2326850 2333185 Seca6g00089 6 2326850 2333185 ECH