Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00084 ATGGCATCATCATGGTGTCGTTCCCTGAAATTGAAAGAGTTGAGCATGAACAGAGCAATGAAGCAGAATCGTCGGTGTTACTCGAAGTTATTAGGAGGTGAGTGTGAGAGTGAGAAAGTGGGAGAGGATGTTCCCAGTTCTGGAATCTGTAGGCCTCTTTCTGAAATACTGAAGGAACTCAACAAGAAAGTCCCCGACTCCCTCGTCAAAACCCGCATTGAGAATAATGGCACTCCCATCAGATACATTCCCTGGCATATAGTGAACCGCATTTTGAACTTGCACGCTCCTGAGTGGTCTGGTGAGGTTCGGAATATCACCTATTCTGCTGATGCCAAGTCTGTCTCTGTTGTTTACCGTGTTACCCTCTATGGGACTGATGCTGAGATATTCAGGGAATCAACCGGTACTGCTTCAGTAGATGACACAGGTTATGGAGATCCGGTTCAGAAGGCAGAAGCAATGGCTTTTCGTAGAGCTTGTGCACGCTTTGGCCTGGGGCTCCATCTTTATCATGAAGATGCATCATAA 531 0.467 MASSWCRSLKLKELSMNRAMKQNRRCYSKLLGGECESEKVGEDVPSSGICRPLSEILKELNKKVPDSLVKTRIENNGTPIRYIPWHIVNRILNLHAPEWSGEVRNITYSADAKSVSVVYRVTLYGTDAEIFRESTGTASVDDTGYGDPVQKAEAMAFRRACARFGLGLHLYHEDAS. 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00084 176 PANTHER - 20 174 IPR037489 GO:0000724|GO:0003677
Seca6g00084 176 Pfam Rad52/22 family double-strand break repair protein 54 174 IPR041247 -
Seca6g00084 176 Gene3D DNA repair protein Rad52/59/22 51 176 IPR042525 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00084 Seca-Chr6 2116660 2119575 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00084 K26556 - gmx:100782719 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca6g00084 6 2116660 2119575 Seca6g00084 6 2116660 2119575 ECH