Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00074 ATGAGGTCTTCTGGAGCACTTGCCCCAAATAATCAGGAGCCATACATTCGTACTAGAGACAATCCATACTTTGATGGCCTTGTAAGAGCAGGTAGTGAGGTTCCCTTGAACTCTCAAGGAGAAGGAGCTAACAGCAGTAATGTTTTGGAAACCAAGCCCAAGAAATCTGTATCAGATATGTCTCAAGAGGTTATGGAAGTCCCAGGTTTCAACTATGAATCCTCTGAACATTCTTTATCTGAGAGGTGGTTAAAGACAAGCAAAATTGCTCCATTTATACAACTTGATATTCAGTCTGAGCTGGCTAATCCAAAACATCTTGGAAAAAGGACTCCTGAAGCTGATGAAGACCATAAGGCTGTGCAATCACCTGCACTGCCACTACCCAACATAGAAAAGACATATATTGTCACTAGAAGAAAAGAGAAGCTATCAAGTGTTCTGCTTCCACTATCTGCAGCTTCATACTATAATGGAGTATCACCAGAAATGGAAATTGTTGAATCATGTGAGAGCATTGACAAGCTAAATGCATATTTGAAAGCAAGAAAGGATGATGTCAATGCTGGTGTACCTGGCAAATTCTTACATGCTTTAATGGGTTCAGATGGTGCTGATGTGGGAACTGTGGCTTCAACCATCATGTACTCTTTCTATCTAAATGTAACTTCAAAAAGTGACCAATTCTGCACAGTACCAATTATCAATATTAACCGGGCAAATATTGGCTCCCATGTTGAACTCAAGTGGTTGCTTGATTCATGTCAAATTGACCAGTCATCCTTAATTTTTGCAGATGAGATTGATCTGTCATATTATGATCTGTTTGGAAGTCTTAAGATAGTGCTGTTGAAGAGCAGCAGGATTGCCAGTAAGCAAGAGAAATTGAAGCAGGCTGTGGTTGAAATTTTTCACTGCAGAAATGGTGAAACAATATATCCATGGGTTAAAAATGTCACAACAGGAGAGCAGGAAAGTTCTTGTTGTACTGCTATAGCTGAGAAATTTGCATCATATTCGCCTGAAATTTTGGCTAGCAAATCATTCAGCAAACTTCTGTTAGGTGGCATACTTTTGGATACTGGGAATCTAAGGGACCCTATTTGTACCTCCAAAGATAAGTACATGGCTTCATTATTGATCAATGGTGCCGGTCGTTATGGATGCAATGGTCTTTACCAATTATTGAAGTACAAAATGCATGACCTTTCCTCTCTGCAAGTAGCGGATATCTTGCGAAGGGATTTCAAGAAATGGACAGGACAAGAAAGTGTAGATTCAAGGTCAGTGTCTCATTTTGGCATGAGTTGTATCGGAATTTCAATCGGGCAGCTTGTCGCTCACACTGAAAATCTAGCACAAGAAATATCATACTTCCAGGCGTCGGAGAAACTTCGAGCACTTATTATCGTTTCGGGCTATTACAATGAGGAAAAGAACTTCAAGAGGGAAGTTTTAGTATCTACGGAATCTGTGAAGCTATTGGAGAGTTTGCTCTTTTTCTTCGATTTCAATGCCTCCCGACTGCCACTCAAGAGTTTACATTTATCAGGTCTTAAAAATGAGATGAGAGCGTATGAGATTGATAAGATTACATCAAGGAAAATAGTAGAGCGTCTGATAGAAGAGTTTGTTGGGATACCGAGAGCCTAG 1653 0.3999 MRSSGALAPNNQEPYIRTRDNPYFDGLVRAGSEVPLNSQGEGANSSNVLETKPKKSVSDMSQEVMEVPGFNYESSEHSLSERWLKTSKIAPFIQLDIQSELANPKHLGKRTPEADEDHKAVQSPALPLPNIEKTYIVTRRKEKLSSVLLPLSAASYYNGVSPEMEIVESCESIDKLNAYLKARKDDVNAGVPGKFLHALMGSDGADVGTVASTIMYSFYLNVTSKSDQFCTVPIININRANIGSHVELKWLLDSCQIDQSSLIFADEIDLSYYDLFGSLKIVLLKSSRIASKQEKLKQAVVEIFHCRNGETIYPWVKNVTTGEQESSCCTAIAEKFASYSPEILASKSFSKLLLGGILLDTGNLRDPICTSKDKYMASLLINGAGRYGCNGLYQLLKYKMHDLSSLQVADILRRDFKKWTGQESVDSRSVSHFGMSCIGISIGQLVAHTENLAQEISYFQASEKLRALIIVSGYYNEEKNFKREVLVSTESVKLLESLLFFFDFNASRLPLKSLHLSGLKNEMRAYEIDKITSRKIVERLIEEFVGIPRA. 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00074 550 PANTHER BNIP - RELATED 146 538 - -
Seca6g00074 550 MobiDBLite consensus disorder prediction 29 55 - -
Seca6g00074 550 Gene3D DHHA2 domain 402 547 IPR038222 -
Seca6g00074 550 Pfam DHHA2 domain 396 535 IPR004097 GO:0005737|GO:0016462
Seca6g00074 550 SUPERFAMILY DHH phosphoesterases 198 475 IPR038763 -
Seca6g00074 550 MobiDBLite consensus disorder prediction 1 20 - -
Seca6g00074 550 MobiDBLite consensus disorder prediction 1 17 - -
Seca6g00074 550 SMART DHHA2_2 393 541 IPR004097 GO:0005737|GO:0016462
Seca6g00074 550 MobiDBLite consensus disorder prediction 37 55 - -
Seca6g00074 550 Gene3D - 171 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00074 Seca-Chr6 1758235 1769633 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00074 K01514 - gmx:100802064 857.055