Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00070 ATGGGTTGCAACAGCATGAATTTGAATACAGGAGCTGCTTGGATGGGAATGGGAATGGGAACGGGAACGGGTAATCCAAGTAAGCATAGTAAGACTAAGGCACCTGCATCTTCACTCTCACTCTCACTTTCGATTACGCCGCGCCAACTATCCTTTGCTTCTTCTTCTTCATCATCTGCTAATGCCTTTGGCCTCCGTTTCTTTTGCGATGTCTCTGCTCGATCCCCTTTCAATTCTCATTCCCATTCTATGATTGTGAAGGCTAAGGTGAAGGAGGAGCCGCTCCATATCATGATTTCAGGTGCTCCCGCTTCTGGTAAAGGAACTCAATGCCACCTTATCACCAACAAATACGGTTTGGTGCATGTTGCTGCTGGAGATTTGCTTAGGGCGGAGATTGCGACAGGAAGTGAAAATGGAAAGCGAGCAAAAGAATATATGGAGAAGGGACAGTTGGTCCCTGATGAAATTGTTGTCATGATGGTCAAGGATCGTCTCTTGAAGCAAGATTCTATGGAGAAAGGTTGGCTTTTGGATGGGTATCCCAGGAGCTTATCACAGGCTACTGCACTTAAGGAATTTGGGTTTGAACCTGATATTTTTATTCTTTTAGAGGTCTCTGAAGATCTTCTTGTGGAGAGAGTAGTTGGACGGAGATTAGATCCTGTTACTGGGAAGATATATCACTTGAAGTATTCTCCTCCCGAGACAAAAGAAATTGAAGAAAGGCTTACCCAACGTTTTGATGATACTGAAGAAAAGGTAAAGTTGCGATTGAACACCCATCATCAAAATGTGGAGGCAGTCCTTTCCATGTATAAAGATATAACGATTAAGATTAATGGAAATGTCTCTAAGGAGGAAGTATTTGCTCAAATTGATGGTGCACTTACAAGTCTTTTAGAGCAAAGGAAAGCTGCTTCAGGATCTGTGGTAGCATAG 942 0.431 MGCNSMNLNTGAAWMGMGMGTGTGNPSKHSKTKAPASSLSLSLSITPRQLSFASSSSSSANAFGLRFFCDVSARSPFNSHSHSMIVKAKVKEEPLHIMISGAPASGKGTQCHLITNKYGLVHVAAGDLLRAEIATGSENGKRAKEYMEKGQLVPDEIVVMMVKDRLLKQDSMEKGWLLDGYPRSLSQATALKEFGFEPDIFILLEVSEDLLVERVVGRRLDPVTGKIYHLKYSPPETKEIEERLTQRFDDTEEKVKLRLNTHHQNVEAVLSMYKDITIKINGNVSKEEVFAQIDGALTSLLEQRKAASGSVVA. 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00070 313 ProSitePatterns Adenylate kinase signature. 176 187 IPR033690 -
Seca6g00070 313 Hamap Adenylate kinase [adk]. 95 298 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca6g00070 313 PRINTS Adenylate kinase signature 176 192 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca6g00070 313 PRINTS Adenylate kinase signature 126 140 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca6g00070 313 PRINTS Adenylate kinase signature 98 111 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca6g00070 313 PRINTS Adenylate kinase signature 247 262 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca6g00070 313 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 300 IPR027417 -
Seca6g00070 313 CDD ADK 97 289 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca6g00070 313 Gene3D - 91 310 IPR027417 -
Seca6g00070 313 PANTHER NUCLEOTIDE KINASE 84 294 IPR000850 GO:0005524|GO:0006139|GO:0019205
Seca6g00070 313 Pfam Adenylate kinase 99 275 - -
Seca6g00070 313 FunFam Adenylate kinase, chloroplastic 91 302 - -
Seca6g00070 313 NCBIfam adenylate kinase 97 296 IPR006259 GO:0004017|GO:0005524|GO:0016776
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00070 Seca-Chr6 1727762 1735910 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00070 K00939 - gmx:100784319 398.282