Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00065 ATGAGCGGTGCTGTGGGAAGCAATATGGCTGGAACTGGGAATCTTATGCATGCGATTCAGTACGATTCTTATGGTGGAGGACCCGCTGGCTTCAAGCACGTTCAAGTTCCCGTTCCCTCTCCAAAGACAAATGAAGTTCTACTCAAATTGGAAGCAACTAGCATCAACCCTATCGATTGGAAGATTCAGAAGGGTGTTCTCCGCCCTTTGTTTTTCCCTCGAAAATTTCCCCACATACCTTGCACTGATATAGCAGGAGAGGTAGTAGAGGTTGGACCTCAAGTCAAAGATTTCAAAGTCGGCGACAAAGTCCTTGCTAAACTCTCACATCTTGTACTTATCTCTTCCTCTCACTTGTTCTTACCTTACTTCAATTCTCTATTCTTTGCTGATTATGGAGGTGGACTAGCTGAGTTTGCTGTGGCCAGTGAGAGCTTAACAGCTGCCAGACCATCTGAAGTCTCAGCTGCTGAAGCTGCGGGTTTGCCCGTGGCTGGTCTCACAGCTCATGATGCTCTCACTCAAATTGCAGGACTCAAGCTTGATGGGACTGGCCAGCCCAAGAACATTTTAGTAACTGCTGCTTCAGGTGGTGTTGGTCTATACGCTGTTCAACTAGCAAAACTTGGGAATGCCCATGTCACAGCCACTTGTGGGGCTCGCAACATTGACTTGGTGAAGGGCTTAGGTGCTGATGAGGTTCTTGACTACAAGACTCCAGAGGGGGCAGCACTGAGGAGTCCATCTGGTAGGAAATATGATGCAGTGGTAAATTGTACAACTGGAATACCTTGGTCAACTTTTGATCCTAATTTGACTGAAAAGGGGGTTGTAATTGATTTAACGCCTGGCCCAAGTTCATTGATGACTTTTGCCCTGAAGAAACTTACCTTTTCCAAGAAGCAGCTGGTGCCATTTTTTGTAACTGTAAAGCGTGAGGGCCTGGAATATCTACTTCAATTAGTGAAGGAGGGGAAACTCAAGACAATTATTGACTCTAAGTTCCCTTTGAGCAAAGCTGAAGATGCTTGGGCTAAGAGCATTGATGGCCATGCTACTGGTAAAATCATCGTGGAGCCATAG 1083 0.4617 MSGAVGSNMAGTGNLMHAIQYDSYGGGPAGFKHVQVPVPSPKTNEVLLKLEATSINPIDWKIQKGVLRPLFFPRKFPHIPCTDIAGEVVEVGPQVKDFKVGDKVLAKLSHLVLISSSHLFLPYFNSLFFADYGGGLAEFAVASESLTAARPSEVSAAEAAGLPVAGLTAHDALTQIAGLKLDGTGQPKNILVTAASGGVGLYAVQLAKLGNAHVTATCGARNIDLVKGLGADEVLDYKTPEGAALRSPSGRKYDAVVNCTTGIPWSTFDPNLTEKGVVIDLTPGPSSLMTFALKKLTFSKKQLVPFFVTVKREGLEYLLQLVKEGKLKTIIDSKFPLSKAEDAWAKSIDGHATGKIIVEP. 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00065 360 Pfam Zinc-binding dehydrogenase 229 358 - -
Seca6g00065 360 Pfam Alcohol dehydrogenase GroES-like domain 44 107 IPR013154 -
Seca6g00065 360 Gene3D - 23 358 - -
Seca6g00065 360 Gene3D - 173 311 - -
Seca6g00065 360 SUPERFAMILY GroES-like 16 178 IPR011032 -
Seca6g00065 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 154 312 IPR036291 -
Seca6g00065 360 SMART PKS_ER_names_mod 26 358 IPR020843 GO:0016491
Seca6g00065 360 PANTHER ZINC-TYPE ALCOHOL DEHYDROGENASE-LIKE PROTEIN C16A3.02C 14 359 - -
Seca6g00065 360 CDD MDR1 19 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00065 Seca-Chr6 1604486 1606965 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00065 K00224 - gmx:100790762 554.288