Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00054 ATGATGAATGTTTTAGGATTGAGTCTGGTTCTGACTTCACTCGCAGCAGCAAGCATTTTCTCTCCAAGTTCCACCCAAAAGCAAGGTGCCAACACCATTGTCAAAGAAGGCCACAGAGTTGTGGTAGTTGAATATGACCAAGACGGTTACCAAAACACCAAAATCTCAATCTCCCCACCAGAACAACCACCCCATCACGATTCTGATCAAAAGGTAGAATCTTTCGTGCCTGACAACACCAAAGATAGGATCAAAGAGGCTGCTTCTGTTCTCCCTAACATGGGTCAAGGCATTTCACAAGATTCAACCTTTCTTCATCCTAAAGACCTCATTTGTGATGCCTATGGAAGATGCAAGCATAAAATTGCTGGTGCAATGGAGAAGGCCAAAGATAAGGCTCAAGAGACCCTCAATAATGCCAACAATGAAGTTGGTAACACTGTTGGTAAGGCTAAGGAAACTGTGTATGATAAAGCACAAGAATCTGTAGAGAAAGGAAAAGGGGTGGGGCAAACGGTGAAGGAGCATATAGTTAGAAACGTGTCAGAGGCAGGTAATAGTGTGAAAGATGCAGTAAAGGGTGTTGCAAGCAATTTAGTGTCCATGGAGACACTGAGTTCTTTGATGAGGGTGGTTCATCTGTTGGGGTTTGGAACAGCTTATGGAATGTGTGTGTGGATCACGTTTATCTCTAGCTATGTGTTGTCCAAAGCTATGCCAAGGCAACAATTTGCTGTGGTGCAGAGTAAGATCTACCCTGTTTATTTCAGGGCTATGGCTTATAGTGTTGGAATTGCTTTATTGGGGCATGTCTTGGGCCATAGAAAGAGACAAGGGGTTGAAATATTACAAGCATATAACCTTCTAGCCTCGCTTCTCACACTTCTCGCCAATTCTATATACTTGGAGCCACGGGCCACTAAGTTGATGTTTGAAAGGATGAAAATAGAGAAAGAAGAAGGAAGGGGTAGAGATGATACGAGTGCTGAACGTAACAGAACAGAAGAACATCCTAAAAAATCTTCTGCAGCAACACAAGGGACAGAGCAGGATGCAGTGAAATCAAAGATAATCAAACTGAATAACAGGCTGAAGAAATTGAATTCATATTCGTCATTCCTGAATATCCTGAATCTCATGTCTCTTACTTGGCATCTGGTTTATTTGGCTCAACGTGTTCACCATAATTGCTGA 1194 0.4246 MMNVLGLSLVLTSLAAASIFSPSSTQKQGANTIVKEGHRVVVVEYDQDGYQNTKISISPPEQPPHHDSDQKVESFVPDNTKDRIKEAASVLPNMGQGISQDSTFLHPKDLICDAYGRCKHKIAGAMEKAKDKAQETLNNANNEVGNTVGKAKETVYDKAQESVEKGKGVGQTVKEHIVRNVSEAGNSVKDAVKGVASNLVSMETLSSLMRVVHLLGFGTAYGMCVWITFISSYVLSKAMPRQQFAVVQSKIYPVYFRAMAYSVGIALLGHVLGHRKRQGVEILQAYNLLASLLTLLANSIYLEPRATKLMFERMKIEKEEGRGRDDTSAERNRTEEHPKKSSAATQGTEQDAVKSKIIKLNNRLKKLNSYSSFLNILNLMSLTWHLVYLAQRVHHNC. 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00054 397 MobiDBLite consensus disorder prediction 320 342 - -
Seca6g00054 397 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44 181 394 - -
Seca6g00054 397 Coils Coil 123 143 - -
Seca6g00054 397 Gene3D Helix hairpin bin 109 206 - -
Seca6g00054 397 MobiDBLite consensus disorder prediction 320 350 - -
Seca6g00054 397 Pfam Domain of unknown function (DUF4149) 216 314 IPR025423 -
Seca6g00054 397 MobiDBLite consensus disorder prediction 52 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00054 Seca-Chr6 1432374 1433907 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00054 - - lja:Lj3g3v3754400.1 472.626