Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00042 ATGGCGAAATCGGAGAATTGTGAGAATAAGAATAACATGGGATCAACATCAGCAAAAGTTCATCCTTCGAATGATCCTCCAGAACTGGATCCTGAATCTTGCGCCCTCGAGAAGTTCAGACTCTACGAAACCAGAGCCAGGTTTTACCTCATCGGCAGTGATCGCAACAAGAGGTTCTTCCGTGTCTTGAAAATCGATCGATCTGAACCCTCCGATCTCAACATCAGCCAAGACCCTGTCTTATATTCCCCTCAAGAAATCAAGAGTTTGCTTCAGCGAATTGCTGAAGGTAACAGAGCCACTGGCGGCCTCACTTTCGTCGCCAAGGTTTTTGGAATTGCCGGCTGCATCAAGTTTCTCGAGTCCTACTATTTGATTCTCGTTACCAAGCGCAGACAAATTGGTTCTATATGTGGTCATGCTATCTATAGCATCAAGGAGAGCCAATTGATAACCATTCCACATGTTTCAATTCAATCTGATTTAGCTCACTCTAAAACTGAGCTCAGATACAAAAAGCTTTTGTCCAGTGTCGATTTGACCAAGGATTTTTTCTTTAGTTACACTTACCCTATTATGCAAAGCTTGCAAAAGAACGTCTTGTCTGATCAAGAAGGAGGGATGCCATATGATAATATATTTGTTTGGAATGCTTATTTAACACAAGCAATCAGATCAAGATGCAATAACACCATTTGGACCATAGCTTTAGTTCATGGCCATTTTAGGCAGATTCGCCTATCAATCTTTGGGAGGGACTTCAGCGTTTCCTTGATTTCTAGACGATCTAGACATTTCGCAGGGACACGGGAAGGATTGAAGGAGGAGGAGCAACAAAACAGTTACTTAAAAAGGGGAGTGAATGATCGGGGGAGGGTTGCCAATGATGTTGAGACAGAGCAGATTGTCCTTGATGAAGAAGCTGGCTCTTGCAAAGGCAAAATGAGTTCAGTTGTGCAAATGCGTGGATCAATCCCACTTTTCTGGTCACAAGAAGCATCAAGATTTAGCCCTAAGCCTGACATAATCTTGCAGAGGTATGATCCAACATACCAGGCAACGAAGTTGCATTTTGAAGACCTTGCTAAGAGATATGGCAACCCGATTATTGTTCTTAATTTGATCAAGACAGTTGAGAAACGGCCTCGAGAAATGATGCTGAGGCGTGAATTTGCAAATGCTGTTGGATATCTGAACCAAATTCTACCGGTAGAGAACCATCTTAGATTTATTCACTGGGACTTTCACAAGTTTGCGAAAAGCAAGTCTGCCAATGTTCTGGCAGTTTTAGGAGCTGTAGCAAGTGAAGCACTTGATTTAACGGGTTTTTACTACAGTGGCAAACCCAACATCATAAAGAGGGCCAACAAGAGCAATCGAACAAGCACAGGAAGGGATACCTCGCTGAGAGACCTGAGAGCTAGTTCTGGGGATCTTGCAAGGATAGGAAGCAGTAGTGAAATGCTAAATTCTATGGTTAATCGAGACAGAGAGACTGACATGAACCATCAGAACAAAAAAGATAATTTTAGTAGTGATGCACCACATTTTCAGAGCGGAGTTCTTCGTACTAACTGCATTGACTGCCTTGACCGTACAAATGTCGCTCAATATGCTTATGGTCTTCAAGCTTTAGGACGCCAGCTCCATGCAATGGGTTTGACTGATGTGCCAAAAGTGGATCCTGATAGTAGTATTGCTGCAGCTCTAATGGATATGTATCAAAGTATGGGAGATGCGCTTGCTCAGCAGTATGGTGGTTCTGCAGCTCATAATACTGTATTTCCAGAGAGGCAGGGCAAGTGGAAAGCAACAACACAATCAAGAGAGTTTTTAAAATCCATAAAACGATACTATAGCAATGCTTACACAGATGGTGAAAAACAAGATGCAATAAATTTATTTTTAGGTTACTTCCAACCACAGGAAGGGAAACCTGCTCTCTGGGAGCTTGATTCAGATTATTATCTCCATGTATCCGGCATTGGGGATGATCTAATCCCTGAGAAGTGTTCTGAACCAAATCTTAAGCCTTCTGGGAGAGCTGGAATGGTCTTCACCCCTATACCAGCTTGCAGAGATGACTTCTCACGCATAAAGTTGACATCATTTGACAAGTTAATTGAAAAGACCTGTAGTACAATTAAAAATGTAAGACTTTGCTGTGAACCTGATCAGAGACCGGGTGGTAGTTCTGGAAACAGTGGTGTGGCACCTGATGCAGCTGAGATACAGCTTAAAAGCCCAAATTGGCTTTTTGGCCAGAGAAAGTATGAAGAAGGTTCCTCTGCTGCAAAAGTTGCTTCTCGTGAAACTGACATTGAAGGATCTCATGCTAATGGCTTTTGCAACTTGAATTGGCTTTCCTCTGGCAATGACATGAATGAAGAGGATGTTTTCCAGAGGTATGTATGTAAAACGTGCATTATCCTTGCAAGACTTTGA 2445 0.4245 MAKSENCENKNNMGSTSAKVHPSNDPPELDPESCALEKFRLYETRARFYLIGSDRNKRFFRVLKIDRSEPSDLNISQDPVLYSPQEIKSLLQRIAEGNRATGGLTFVAKVFGIAGCIKFLESYYLILVTKRRQIGSICGHAIYSIKESQLITIPHVSIQSDLAHSKTELRYKKLLSSVDLTKDFFFSYTYPIMQSLQKNVLSDQEGGMPYDNIFVWNAYLTQAIRSRCNNTIWTIALVHGHFRQIRLSIFGRDFSVSLISRRSRHFAGTREGLKEEEQQNSYLKRGVNDRGRVANDVETEQIVLDEEAGSCKGKMSSVVQMRGSIPLFWSQEASRFSPKPDIILQRYDPTYQATKLHFEDLAKRYGNPIIVLNLIKTVEKRPREMMLRREFANAVGYLNQILPVENHLRFIHWDFHKFAKSKSANVLAVLGAVASEALDLTGFYYSGKPNIIKRANKSNRTSTGRDTSLRDLRASSGDLARIGSSSEMLNSMVNRDRETDMNHQNKKDNFSSDAPHFQSGVLRTNCIDCLDRTNVAQYAYGLQALGRQLHAMGLTDVPKVDPDSSIAAALMDMYQSMGDALAQQYGGSAAHNTVFPERQGKWKATTQSREFLKSIKRYYSNAYTDGEKQDAINLFLGYFQPQEGKPALWELDSDYYLHVSGIGDDLIPEKCSEPNLKPSGRAGMVFTPIPACRDDFSRIKLTSFDKLIEKTCSTIKNVRLCCEPDQRPGGSSGNSGVAPDAAEIQLKSPNWLFGQRKYEEGSSAAKVASRETDIEGSHANGFCNLNWLSSGNDMNEEDVFQRYVCKTCIILARL. 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00042 814 Pfam SacI homology domain 111 418 IPR002013 GO:0016791
Seca6g00042 814 ProSiteProfiles Sac phosphatase domain profile. 175 587 IPR002013 GO:0016791
Seca6g00042 814 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 24 796 IPR043573 GO:0043813|GO:0046856
Seca6g00042 814 MobiDBLite consensus disorder prediction 1 22 - -
Seca6g00042 814 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00042 Seca-Chr6 1026515 1045454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca6g00042 1 807 Acyl Lipid Metabolism Gene Families AT1G22620 76.942 0.0 1296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00042 K22913 - gmx:100804786 1486.09