Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca6g00026 ATGATGGGGGGAAGTTCTTTTGATGATGATTGGGAGCTTACCTCCACATCCAATGAGGTTCGGACAGTGGTCTTAGTTGGACGCACTGGCAATGGCAAGAGTGCAACAGGCAATACTATTCTTGGAAGGAAGGTCTTCAAGTCGAGGGCTAGCTCCTCTGGTGTAACCACCTCCTGTGAATTGCAGACGACTGTACTCAATGATGGACAGACTATTAATGTTATAGACACTCCAGGATTATTTGATTCTTCTGCTGGATCTGAGTTTGTTGGCAAGGAAATAGTCAAGTGCATTGATTTGGCTAAGGATGGGATCCATGCTGTCCTTGTAGTGTTCTCTGTTAGAACACGCTTTACTCAGGAAGAAGAAACTGCTCTCCGAAGTTTGCAGACATTATTTGGAAGCAAAATTGTTGACTACATGATCGTTGTCTTCACTGGAGGAGATGAATTGGAAGACAATGATGAGACATTGGAAGATTATTTAGGCCGCGAATGTCCAGAGCCTTTAAAGGAAATTCTTTCTTTGTGTAAGGATCGTTATGTGCTTTTTGATAACAAGTCTAAGAATGAAAGGAAGCGGCTAGGACAAGTTCAGCAACTTCTCTCTCACGTAAACATGGTTTTATCGAAGAATGGTGGACAGCCTTATACAGATGAGTTATTTGCAGAACTGAAGAAGGGAGCATTGATGCTGCATAACCAAGAAAGAGAGGTTGATTCCTTGAAAGGATATTCAAATGGAGAAATCTTGGAGTTTAAAAAGCTAATGCAGCAATCATATGATGACCAGCTAAAACGAATTACTGAGATGGTTGAGTCAAAGTTGAGGGAGGCAACTACAAGACTTGAGCAACAATTGGCAGAAGAGCAAGCTGCAAGACTTAAGGCAGAAGAGACTGCAGCATTAGCTCAAAAGAGATCAGATGATGAAATACGTAAACTCAGGGAACATCTTGAGCAGGCACATGAACAACTCCGCATAAAGCAAGATCGTTGTTCCATTCTCTGA 1011 0.4204 MMGGSSFDDDWELTSTSNEVRTVVLVGRTGNGKSATGNTILGRKVFKSRASSSGVTTSCELQTTVLNDGQTINVIDTPGLFDSSAGSEFVGKEIVKCIDLAKDGIHAVLVVFSVRTRFTQEEETALRSLQTLFGSKIVDYMIVVFTGGDELEDNDETLEDYLGRECPEPLKEILSLCKDRYVLFDNKSKNERKRLGQVQQLLSHVNMVLSKNGGQPYTDELFAELKKGALMLHNQEREVDSLKGYSNGEILEFKKLMQQSYDDQLKRITEMVESKLREATTRLEQQLAEEQAARLKAEETAALAQKRSDDEIRKLREHLEQAHEQLRIKQDRCSIL. 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca6g00026 336 CDD AIG1 21 227 - -
Seca6g00026 336 Gene3D - 21 237 IPR027417 -
Seca6g00026 336 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 22 321 IPR045058 -
Seca6g00026 336 Pfam AIG1 family 21 234 IPR006703 GO:0005525
Seca6g00026 336 Coils Coil 269 332 - -
Seca6g00026 336 ProSiteProfiles AIG1-type G domain profile. 18 226 IPR006703 GO:0005525
Seca6g00026 336 FunFam Immune-associated nucleotide-binding protein 9 20 237 - -
Seca6g00026 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 182 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca6g00026 Seca-Chr6 829236 834984 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca6g00026 - - gmx:100801425 550.436