Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12181 ATGGAGGAGGAAAGGGATTCAAAGGAGTTAATTGGGATGGAGGGGCTTCCAGATCATGTGGTGATAGAGATATTCATAAGAGCAGGAGTGAGTGAATGGACGCATATATCATGTGTCAACAAGCACTGGGCCTCTCTTCTACGCACCCAATGCTTCTGGCAAGCTGCTCTTGCTCACAAATATCCATTCGCGGATCCTTCTGAAACATGGCTTGGCCCTATTCCTCCTCCAGGTTTAGCTAAGAGGAGATTCATCGCCTTATACATTAGTCAACACATCTTTGCTTCCGATCCTCAAATACAAATAGATGAGATTGTTGGCCATAGTTATCTCTTTTTGAAAGAGCAGCTTCAGCTTTCTATTATGCCTCCTCATAGTGGAATACTTCATGGAACCATGATTGATCAGTTCATTGCTTGTGGCAAGTCAAGAGATGTAGCCCATGAACTTGCTTCTCGGATTTGGCTTGCTGTTCTTGACAATTTGGAGGAAAACCACCATACCTTTTGCTTACTTAAACGCCTTGCCCAAGAAGGGGACGTTTTTCTTCCATACCCTTACACTAGATCAGTCAAAGTCCAATGGAGGGTGTTTGAGAAGCTTTTTACTGATTTCCGTGATTGCTTCAACCATGTAGATTATTATGATATGTTGGCATGTGCTAAAAGCAGGTTTCAGTCAATACCATCTTTTTGGTTAGGTTACTAG 708 0.4266 MEEERDSKELIGMEGLPDHVVIEIFIRAGVSEWTHISCVNKHWASLLRTQCFWQAALAHKYPFADPSETWLGPIPPPGLAKRRFIALYISQHIFASDPQIQIDEIVGHSYLFLKEQLQLSIMPPHSGILHGTMIDQFIACGKSRDVAHELASRIWLAVLDNLEENHHTFCLLKRLAQEGDVFLPYPYTRSVKVQWRVFEKLFTDFRDCFNHVDYYDMLACAKSRFQSIPSFWLGY. 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12181 235 Gene3D - 9 55 - -
Seca4g12181 235 Pfam F-box domain 15 53 IPR001810 GO:0005515
Seca4g12181 235 SUPERFAMILY F-box domain 13 82 IPR036047 GO:0005515
Seca4g12181 235 PANTHER OS09G0497600 PROTEIN 5 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g12181 Seca-Chr4 262569351 262571071 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12181 - - tpra:123920473 369.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g12181 4 262569351 262571071 Seca4g12181 4 262569351 262571071 ECH