Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12175 ATGGGGCAGTCGAAGAAGAGTGAGACGGTGCACTCGCCGCTCGTGACCTATTTTTCCATGATATCTCTCCTCACACTATGTCCTCCATTTGTTATACTCCTATGGTACACGATGACAGCTGCGGATGGATCGGTTACAGAGACTTGGGATTACTTGAAGCAAAACGGGTTGCAAGGCTTCATACGTATATGGCCTAAACCCACTGCTTCCGCATGCAAAATCATCGCCATCTATGCTGCATTTGAAGCTGCTCTTCAGCTTCTTCTTCCTGGTAAAACCGTTTACGGCCCTATTTCTCCAGCTGGCAATCGACCTGTCTACAAGGCAAATGGTGTTGCGGCATATTTAGTCACCTTGATTACCTATCTTGCCCTTTGGTGGTTTGGGATATTCAACCCTTCGATTGTCTATGATCATTTGGGAGAGATATATTCAGCACTCATCTTTGGGAGCTTTGTCTTTTGTATTTTCTTATACATAAAAGGTCATTTGGCACCATCTTCTACCGATTCTGGCTCATCTGGGAACATAATCATTGATTTTTACTGGGGTATGGAGCTGTATCCACGCATTGGAAAATATTTTGACATAAAAGTTTTCACAAACTGCCGATTTGGGATGATGTCATGGGCTGTTCTTGCCTTGACCTATTGCATAAAGCAGTATGAAGAAAATGGGAAAGTAGCCGACTCAATGCTTGTAAATACGACATTAATGCTGGTGTATGTTACCAAGTTTTTCTGGTGGGAAGCTGGATATTGGAACACAATGGATATTGCACATGATCGAGCTGGCTTTTATATATGCTGGGGCTGTTTGGTGTGGGTTCCATCTGTGTATACATCTCCCGGGATGTACCTTGTCAACCATCCTGTAAATCTTGGCACTGAGCTAGCGCTCTTTATTTTAGTGGCTGGCATTCTTTGCATATACATCAACTATGATTGTGACAGGCAAAGGCAAGAATTTCGTAGGACAAATGGAAAATGCTTGGTTTGGGGAAAAGCTCCATCAAAGATAGAGGCCTCGTATACTACTACTTCTGGGGAAACAAAAAAAAGCCTTCTTTTAACCTCTGGATGGTGGGGATTATCTCGTCATTTTCATTATGTCCCTGAAATACTAGCTGCTTTCTTCTGGACAGTCCCAGCTCTTTTCCATCATGTAAGAATGTCTGTTTTACAAGTTGAAAATTGGAAAGAACGTTAA 1209 0.4251 MGQSKKSETVHSPLVTYFSMISLLTLCPPFVILLWYTMTAADGSVTETWDYLKQNGLQGFIRIWPKPTASACKIIAIYAAFEAALQLLLPGKTVYGPISPAGNRPVYKANGVAAYLVTLITYLALWWFGIFNPSIVYDHLGEIYSALIFGSFVFCIFLYIKGHLAPSSTDSGSSGNIIIDFYWGMELYPRIGKYFDIKVFTNCRFGMMSWAVLALTYCIKQYEENGKVADSMLVNTTLMLVYVTKFFWWEAGYWNTMDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVNLGTELALFILVAGILCIYINYDCDRQRQEFRRTNGKCLVWGKAPSKIEASYTTTSGETKKSLLLTSGWWGLSRHFHYVPEILAAFFWTVPALFHHVRMSVLQVENWKER. 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12175 402 PANTHER DELTA(14)-STEROL REDUCTASE 5 389 - -
Seca4g12175 402 ProSitePatterns Sterol reductase family signature 1. 175 190 IPR018083 GO:0016628
Seca4g12175 402 Pfam Ergosterol biosynthesis ERG4/ERG24 family 47 389 IPR001171 GO:0016020|GO:0016126|GO:0016628
Seca4g12175 402 Gene3D - 203 396 - -
Seca4g12175 402 FunFam Putative 7-dehydrocholesterol reductase 227 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g12175 Seca-Chr4 262531109 262536296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca4g12175 7 388 Miscellaneous Gene Families AT1G50430 84.555 0.0 674
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12175 K00213 - egr:104450695 736.873