Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12168 ATGTCACGAGAAACGGTGTACGTTCAGCAGTGTATGGGCGTTAATGGCTTGGAGAAGATCATTCTTAGAGAAGTTCGTGGCTTCTCTGCTGAGGTCTATCTATACGGGGGTCAGGTTACATCCTGGAAGAATGAACTTGGGGAAGAATTGCTCTTTGTCAGTAGTAAGGCTAATTTTAAGCCTCCAAGAGCTATACGTGGAGGCATTCCAATATGCTTTCCTCAATTTTCAAATCTAGGCTCTCTTGAACATCATGGATTTTCAAGGAACAGGTTTTGGACCTTAGATCCAAATCCCCCACCATTTCCAACAACTAGCACCAATAGAGCTTTCATTGATCTGATTCTTAAGCAGTCTGAAGATGAAACAAAGAATTGGCCTCACAGATTTGAGTTTCGCCTGAGGATAGCTTTGGGTCCAGCAGGAGATTTGATGTTGACATCCCGCATTCGAAATACAAATACAGATGGGAAATCCTTTACCTTCACATTTGCCTATCAGACATACTTCTATGTTACTGACATCAGTGAAGTTCGAATAGAAGGACTAGAGACACTGGATTATCTGGACAACTTGAACAATAGGGAGCGGTTTACTGAACAAGGGGATGCTATAACATTTGAGTCTGAAGTGGACAAAGTATACTTAAGCACCCCCACAAAAATTGCTATCATAGACCATGAAAGGAAGAGAACTTTTGTATTGCGGAAAGATGGGCTTCCTGATGCTGTGGTATGGAACCCCTGGGACAAGAAAGCAAAAACCATATCTGATTTGGGGGATGGTGATTACAAACATATGCTCTGTGTTCAGGCTGCTTGTGTAGAAAAAGCAATTACTCTCAAACCTGGTGAAGAGTGGAAAGGAAGGCAGGAGATATCTGCAGTTCCTTCAAGTTATTGCAGTGGTCAACTCGACCCACGGAGAGTGCTTTTCAGTTTTTAG 945 0.4254 MSRETVYVQQCMGVNGLEKIILREVRGFSAEVYLYGGQVTSWKNELGEELLFVSSKANFKPPRAIRGGIPICFPQFSNLGSLEHHGFSRNRFWTLDPNPPPFPTTSTNRAFIDLILKQSEDETKNWPHRFEFRLRIALGPAGDLMLTSRIRNTNTDGKSFTFTFAYQTYFYVTDISEVRIEGLETLDYLDNLNNRERFTEQGDAITFESEVDKVYLSTPTKIAIIDHERKRTFVLRKDGLPDAVVWNPWDKKAKTISDLGDGDYKHMLCVQAACVEKAITLKPGEEWKGRQEISAVPSSYCSGQLDPRRVLFSF. 315
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12168 314 PIRSF PHexose_mutarotase 7 301 IPR025532 -
Seca4g12168 314 CDD D-hex-6-P-epi_like 27 294 IPR025532 -
Seca4g12168 314 SUPERFAMILY Galactose mutarotase-like 14 293 IPR011013 GO:0003824|GO:0005975|GO:0030246
Seca4g12168 314 Gene3D - 15 300 IPR014718 GO:0030246
Seca4g12168 314 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 14 299 - -
Seca4g12168 314 Pfam Aldose 1-epimerase 20 293 IPR008183 GO:0005975|GO:0016853
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Seca4g12168 Seca-Chr4 262477260 262481215 Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12168 K01792 - gmx:100784457 575.859