Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12105 ATGGTGGTGTCCGTGTCCATGGCCATTTCATCTCCACCTTACAACCTCATCTCTCTTCGTCCACGCGTTTCTTTCACTTCATCTTCATCTTCATTTTCTACCGCTCAAATTCTCTCATGCAGGCTCAGGCTCACCACCAAAATCCAAAGCCTTGGAGTTGGAAAAGAAGAAGGTGCAGCCTCGGAGCCAAAGGCAAAGCAAGGTTTTGATCCCAAAGCTGGTGTATCCATCTATAAACCCAAGTCCTATGAAGTTCTCGTCACTGATGCTGCCAATTCTCTCTCTTATGCTCTTCAAGATGGAAAACTTCGCCTCGAGATCGATTTCCCGCCCTTGCCCAGCAACATATCTTCATATAAGGGATCTTCAGATGATTTCATCGATGCCAACATTCAACTCGCCTTGGCTGTTGTAAGAAAGCTCCAGGAGAAAAAGGAAACCAGGGCTTGCATTGTATTTCCTGATAAGCCAGAAAAGCGTCGAGCCTCTGAGTTGTTCAAAGCAGCTCTGGATTCAATCGATGGCATTACCATAGGTTCCTTAGATGATGTACCTGGTGGACCTATGACTTCATTTTTCCGATCTGTTAGGAACACCCTTGATTTTGACTTTGAAGATGAGAATGAAGGTCGTTGGCAGTCTAGTGAGCCACCGTCACTCTACATATTCATTAATTGCAGTACACGTGAACTTGCCTATATAGAGAAGTATGTGGAAAAGTTTGCCATGTCAACACCAACACTTTTATTTAATCTGGAACTAGATACACTGCGTGCTGATTTAGGCCTTCTAGGCTTCCCAACCAAAGATTTGCACTACCGCTTTCTTTCTCAATTTACTCCAGTGTTCTATATTCGGATTAGAGAGTATTCAAAGACAGTGGCAATGGCACCTTATATTGTCAATTACAGTGGAGCTGTGTTCCGCCAGTACCCTGTAATTTTCTTTGTAAACTGCTCAGGTCCTTGGCAGGTAATGCTTAAACAAGCAGATGGTTCTTATGCTTGCATAGCAGAAAGTGCAACCCGCTTCTCCCTTGGTGAAGCCAAAGAAGAATTGTTGAGGGTCCTGGGACTTCAAGAAGAAGAGGGAAGCTCCCTAGAATTTCTTCGAAGAGGCTACAAGGCAAGCACGTGGTGGGAAGAAGATTTTGATTTAGAAGTATCTTCTGCATGGCGGAGTTGA 1185 0.443 MVVSVSMAISSPPYNLISLRPRVSFTSSSSSFSTAQILSCRLRLTTKIQSLGVGKEEGAASEPKAKQGFDPKAGVSIYKPKSYEVLVTDAANSLSYALQDGKLRLEIDFPPLPSNISSYKGSSDDFIDANIQLALAVVRKLQEKKETRACIVFPDKPEKRRASELFKAALDSIDGITIGSLDDVPGGPMTSFFRSVRNTLDFDFEDENEGRWQSSEPPSLYIFINCSTRELAYIEKYVEKFAMSTPTLLFNLELDTLRADLGLLGFPTKDLHYRFLSQFTPVFYIRIREYSKTVAMAPYIVNYSGAVFRQYPVIFFVNCSGPWQVMLKQADGSYACIAESATRFSLGEAKEELLRVLGLQEEEGSSLEFLRRGYKASTWWEEDFDLEVSSAWRS. 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12105 394 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 11 381 IPR044687 -
Seca4g12105 394 Pfam Domain of unknown function (DUF1995) 80 350 IPR018962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g12105 Seca-Chr4 261972783 261980139 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12105 - - gmx:100803725 617.076