Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12102 ATGGGCATTGCGGCGGCTATTGGAGTGTTGTCACCCTTTCCGTTCTATTTCTGGCTCTGGAATTCGCCGCAGTCATGGGTGGACCTCTGCGGGAGAGGCCGAGACCCATCCAAGGTTATGGCTTACGTTGCTCATTTCCTCAAGCTGCTTCAGTTCATCTCCCTCTTCTCTGTCTCTTCCTTCCATTGGCCTCCTCCATTCTACTTTTGGCCTCTTTTTGCCTTTGGCCAATTCCTTAACTTCAGGGTTTATCAGCTACTTGGTGAGGCTGGCACATACTATGGTGTACGCTTTGGAAAAACTATTCCCTGGGTAACCGAATTCCCTTTTGGGGTCATCAAAGATCCTCAGTACGTTGGCAGCATTATGAGTCTTGTTGCATGCCTCTCATGGGTTCCTTTTCAATACATTCTCCTGTGGGTTTTAGGATATGTGTTTATGATGCATGTGGAATCTAAAGAAGATCCATCTACTCGTGCCAAGCCACTCCATTGA 495 0.4768 MGIAAAIGVLSPFPFYFWLWNSPQSWVDLCGRGRDPSKVMAYVAHFLKLLQFISLFSVSSFHWPPPFYFWPLFAFGQFLNFRVYQLLGEAGTYYGVRFGKTIPWVTEFPFGVIKDPQYVGSIMSLVACLSWVPFQYILLWVLGYVFMMHVESKEDPSTRAKPLH. 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12102 164 Pfam Phospholipid methyltransferase 71 157 IPR007318 -
Seca4g12102 164 Hamap Phosphatidyl-N-methylethanolamine N-methyltransferase [PEMT]. 1 164 IPR024960 GO:0006656|GO:0008757
Seca4g12102 164 PANTHER PHOSPHATIDYLETHANOLAMINE N-METHYLTRANSFERASE 5 159 IPR024960 GO:0006656|GO:0008757
Seca4g12102 164 Gene3D - 31 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g12102 Seca-Chr4 261943819 261945378 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12102 K00550 - gmx:100301902 318.931