Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12101 ATGGCTGCTGCTACTTATTATTTATTGCCAAATCCGAAGGCTTTTTCACCTTTCCTTAGAAACCCACCTTCCATTCCTTCCACTCATCTAACCCATGTTTCATTATTGGGTTCATTAGACTATCCATTCCATTGTTCCACTAGAAGACCAAATGTTCAGGTCAATGCCAAGAAGAAGAATCCTTGGCTTGACCCTTTTGATGATGGGGAGGACCCCAACTTGGAGTATGGTTCCTTATTTGTAGATGGTAAGCAGGAGGAGGATCCTAGGCCACCAGATGACCCTGACAACCCATATGGCTTCTTGAAATTCCCTGCTGGATATGCAGTGGAGATAGCTTCCTTGGGATTGAAAGTGAGAGGAGATGTGAGGAGGTGCTGCTGTGTGATCTCTGGTGGTGTTTATGAGAACCTCTTGTTCTTTCCAGCAATACAGTTGATTAAGGATAGGTACCCTGGTGTTCAGATTGATGTGGTGGCGTCTGAGAGGGGGAAACAGACTTACGAGTTGAATAAGAATGTGAGGTGGGCAACTGCCTATGACCCTGATGATGAATTTCCAGAGCCTGCAGAGTATACTGATATGATTGGAGTTCTAAAGGGTAGGTACTATGACATGGTCTTAAGCACCAAATTGGCAGGCCTTGGCCATGCAGCATTTTTGTTTATGACAACTGCCCGAGATAGAGTTAGCTATGTCTACCCAAATGTGAATGCTGCAGGAGCAGGATTGCTTTTATCTGATACATTCACACCTGATAGTCTAAACCTTTCAGATGGAGGATATCACATGTATCATCAGATGGTTGACTGGCTGGGAAGACCATTTCGAAAGGTTCCAAGGCAACCTGTGCCACCCTTTAGAGTATCAATTTCAAGGAAGCTGAAGGAGGTTGTGGAGGCAAAATACACAAAAGCAGGTGTCAAAAAAGGGAAATATGTTGTAATTCATGGGATACAATCAGATTCAAAGGCCTCCATGCAGTCTAGGGGTGATCTTGATAGCTTGCTACCCATTGAAGTGTGGGCTGAAATTACTGATGCTATAAGGTATGTCTGTCTTATGCAATCATTTAAGCTTTTGGACTTGTTACTATTTGTTTCATAA 1107 0.4336 MAAATYYLLPNPKAFSPFLRNPPSIPSTHLTHVSLLGSLDYPFHCSTRRPNVQVNAKKKNPWLDPFDDGEDPNLEYGSLFVDGKQEEDPRPPDDPDNPYGFLKFPAGYAVEIASLGLKVRGDVRRCCCVISGGVYENLLFFPAIQLIKDRYPGVQIDVVASERGKQTYELNKNVRWATAYDPDDEFPEPAEYTDMIGVLKGRYYDMVLSTKLAGLGHAAFLFMTTARDRVSYVYPNVNAAGAGLLLSDTFTPDSLNLSDGGYHMYHQMVDWLGRPFRKVPRQPVPPFRVSISRKLKEVVEAKYTKAGVKKGKYVVIHGIQSDSKASMQSRGDLDSLLPIEVWAEITDAIRYVCLMQSFKLLDLLLFVS. 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12101 368 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 137 348 - -
Seca4g12101 368 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 1, CHLOROPLASTIC 11 352 IPR044983 GO:0009507|GO:0009773|GO:0010598
Seca4g12101 368 Gene3D Glycogen Phosphorylase B; 121 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g12101 Seca-Chr4 261940858 261943838 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12101 - - gmx:100803710 639.032