Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12100 ATGTCCGGCCCACCCAGAGTTCGATCCATGAATATGGCCGTCGGCGACCCTGAGGCTCGGCCGGTGCTCGTCCCCTCCGGAAACAAGGCTCGGCCGGTCGATGGACGGAAACCGGTGAAGAAATCGGTGCCGGAGACTGAGAAGAAGCCGGTGCCGCATTCGAACCCTCAATGTGTGTGGGTGTCGCCGCCTATTTCGAAGCGGCAGGATCATCACCAAGCTCTGCTGAAAAACCTTTCGATGAACGCTTCGTGCTCTTCCGATGCGTCGTCGACAGATTCTTCCACTCACAGCAGCGGCGCGTCGTCGAGTGGGAAGGTGGTACGGCGCGTGAGGAAGAAGCAGGCTAGTCCCAAGACAGAGAAGGTGAGCACTGACAATGTGGTTGCTCCTGATAATGCTGTTGAGGCAGATTCAACTGATAGCTTGGAAGGCAAGAAAAGGTGTGCTTGGGTTACACCAAATACAGAATCATATTATGTTGCTTTTCATGATGAAGAGTGGGGAGTTCCTGTTCATGATGACAAGAAACTGTTTGAGTTGCTCAGCTTCTCTGGAGCCCTGGCAGAACTTACATGGCCTACCATTCTTAGCAAAAGGCAGTTATTTCGGGAAGTCTTTTTGGATTTTGATCCAAGTGCTGTTTCAAGAATGAATGAGAAAAAGATAGTTGCACCAGGAAGTCCTGCCAGCTCATTGCTGTCAGAGCTTAGGTTGCGATCCATAATTGAAAATGCACGTCAGATATGTAAGGTAAATATTCCAATGTCTTAA 774 0.5013 MSGPPRVRSMNMAVGDPEARPVLVPSGNKARPVDGRKPVKKSVPETEKKPVPHSNPQCVWVSPPISKRQDHHQALLKNLSMNASCSSDASSTDSSTHSSGASSSGKVVRRVRKKQASPKTEKVSTDNVVAPDNAVEADSTDSLEGKKRCAWVTPNTESYYVAFHDEEWGVPVHDDKKLFELLSFSGALAELTWPTILSKRQLFREVFLDFDPSAVSRMNEKKIVAPGSPASSLLSELRLRSIIENARQICKVNIPMS. 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12100 257 Gene3D Hypothetical protein; domain 2 146 255 - -
Seca4g12100 257 MobiDBLite consensus disorder prediction 33 48 - -
Seca4g12100 257 MobiDBLite consensus disorder prediction 84 140 - -
Seca4g12100 257 MobiDBLite consensus disorder prediction 1 70 - -
Seca4g12100 257 PANTHER OS04G0501200 PROTEIN 5 252 - -
Seca4g12100 257 MobiDBLite consensus disorder prediction 84 105 - -
Seca4g12100 257 Pfam Methyladenine glycosylase 156 252 IPR005019 GO:0006284|GO:0008725
Seca4g12100 257 SUPERFAMILY DNA-glycosylase 147 252 IPR011257 GO:0003824|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g12100 Seca-Chr4 261936287 261940590 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12100 K01246 - gmx:100814780 345.125