Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12082 ATGGATTACAGCTCCGAAGAAGAGTCTGATATCAGTGAATCTGAGATTGTTGACTACTCTGAGAAACCATATGAACAGTTAAGGGCTGGGAAATACAAGGTTAAAAGTTTGAATGGAACTCTTAGATGTCCTTTCTGTGCTGGGAAAAAGAAACAAGATTACAAATATAAAGACTTGTTGCAACATGCATCTGGAGTTGGCAAAGGTTCTGCTAATAGAAGTGCAAAACAAAAGGCAAACCACCTTGCTCTGGCAAGGTATTTGGAGACTGACCTGGCCAGTGAAGCAGAGCAAATCCAGCGCCCAGCTTTACCCCAACCTGTCAATCAACCTCTACAGCAAGATGATCTTTATGTTTGGCCCTGGACGGGCATAATTGTTAACATAAAGAGTAAATTGCATGATTCTGGTTACTGGTTGAAAGAATTTGCTAAGTACAGACCAGTAGATGTTCATATATTCTTGATAGATGGTGACCAGACTGCTCAAGCTGTAATAGACTTTAATAATGACTGGAATGGTTTCATGAATGCAAGTGAATTTGAGAAATCATTTGAAACTGCACATCATGGTAAAAAGGATTGGAATTCAAGAAAGTTGCTGGCCGGCTCAGACATTTATGGATGGGTTGCACGGGAAGATGATTATAATTGTGGAGGGCCAATAGGGGAATACCTTCGCAATAAAGGAAGGTTGAGGACAATTTCAGATATTGTTCAAGAAGCATCTGAAAGCAGAAATAGTATTGTGGCAAACCTAGCAAATGAAATTGATATTACAAATGAAAGCCTTGATGAAATGCAGTATAAGTATAATGAGAAGACTCTGTCTTTGAGTAGGATGCTCGAGGAGAAAGACAAGCTACACAGTGCTTTTGTTGAAGAATCAAGGAATATGCAACGAAGAGCTCGTAATGAGGTACGAAGAATCTTGGAAGAGCAAGAAAAGTTGAGTAGTGAATTGGAGCAAAAAAGGCGGAAGCTTGATTCCTGGAGCAGAGATCTAAATAAACGTGAGGTACTGACTGATCAAGAGAGGCAGAAACTTGAAGAGGACAAGAAGAAGAAAGATTTGAGGAATGAATCGCTCTTGCTAGCTTCGAAGGAGCAGAAGATAGCTGATGAGAATGTCTTAAGGCTTGTTGCAGAGCAACAGAGAGAGAAAGAAGAGGCCTTGAACAAGATACTTCAGCTGGAAAAACAGCTAGATGCCAAACAAAAGTTGGAAATGGAAATTGAAGAGTTAAAAGGGAAATTGCAAGTTATGAAGCATCTTGGAGATGAAGATGATGCAGCTGTCCAGAGTAAGATGAAAGAAATGAATGATGAATTGCAAGAAAAAATAGATGGTTTGGAAAGTTTGGATAGTTTGAATCAAACTCTAATTGTCAAGGAGCGCCAAAGCAATGATGAACTACAGGAAGCTCGGAAAGTATTAATAGAAGGGTTACGTGACAACCTGAATAGTCCTAAAACTAATATTGGGCTCAAGTGTATGGGAGAGCTTGATCAGAAGGTTTTTGTGAATTGCTGCAAAAAAAGATTCCCTCTTGATGAAGAAGCAGGGACAAAGGGAGTTGAGCTTTGCTCTTTGTGGCAAGAGAACGTAAAGAATTCAGCTTGGCATCCATTTAAAGTGATCAAAGTTGATGATAAACCAGAGGCAGTTATAGATGAGGAAGATGATAAATTACAAAAGCTCAAGCTGGAATGGGGAGATGAGATATATAAAGCTGTTGTTACCGCCTTGAAAGAATTGAATGAATACAATGCAAGTGGGGGATATACTGTTTGGGAGCTATGGAACTTCAAGGAAAATAGGAAGGCAACATTAAAAGAAGTTATCCATTATATTGTGGAGCACATCAAACCACTCAAGCGCAAGAGAACATAA 1893 0.3936 MDYSSEEESDISESEIVDYSEKPYEQLRAGKYKVKSLNGTLRCPFCAGKKKQDYKYKDLLQHASGVGKGSANRSAKQKANHLALARYLETDLASEAEQIQRPALPQPVNQPLQQDDLYVWPWTGIIVNIKSKLHDSGYWLKEFAKYRPVDVHIFLIDGDQTAQAVIDFNNDWNGFMNASEFEKSFETAHHGKKDWNSRKLLAGSDIYGWVAREDDYNCGGPIGEYLRNKGRLRTISDIVQEASESRNSIVANLANEIDITNESLDEMQYKYNEKTLSLSRMLEEKDKLHSAFVEESRNMQRRARNEVRRILEEQEKLSSELEQKRRKLDSWSRDLNKREVLTDQERQKLEEDKKKKDLRNESLLLASKEQKIADENVLRLVAEQQREKEEALNKILQLEKQLDAKQKLEMEIEELKGKLQVMKHLGDEDDAAVQSKMKEMNDELQEKIDGLESLDSLNQTLIVKERQSNDELQEARKVLIEGLRDNLNSPKTNIGLKCMGELDQKVFVNCCKKRFPLDEEAGTKGVELCSLWQENVKNSAWHPFKVIKVDDKPEAVIDEEDDKLQKLKLEWGDEIYKAVVTALKELNEYNASGGYTVWELWNFKENRKATLKEVIHYIVEHIKPLKRKRT. 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12082 630 Coils Coil 250 270 - -
Seca4g12082 630 Coils Coil 341 361 - -
Seca4g12082 630 Pfam XS domain 115 217 IPR005380 GO:0031047
Seca4g12082 630 Coils Coil 434 454 - -
Seca4g12082 630 Pfam XH domain 497 628 IPR005379 -
Seca4g12082 630 Gene3D XS domain 111 272 IPR038588 -
Seca4g12082 630 PANTHER RIBONUCLEASE P SUBUNIT P38 3 630 IPR045177 GO:0080188
Seca4g12082 630 Pfam XS zinc finger domain 43 85 IPR005381 GO:0031047
Seca4g12082 630 Coils Coil 381 425 - -
Seca4g12082 630 Coils Coil 293 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g12082 Seca-Chr4 261753048 261759833 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12082 - - gmx:100798940 1061.6