Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca4g12076 ATGGGTCCTGGTGAGGTGAGGGCGGTGATGGAAGACCTTGCTGCTGAGTACAGAGGGAATGCCTATAATCTCATCACCAAGAACTGTAACCATTTCTGCAAAGATGCTTGTGTTAGGCTCACTGGTAATCCTATACCCAGTTGGGTCAATCGTCTTGCTAGGATTGGTTTTTTGTGCAATTGTGTACTTCCTGTGACTTTGAACTCAACCAAAGTTAGGCATCATAGAATAGAAGACAAGCAATGTGAAGGAGAGAAGCAAGCATTAACCAGTGAGCCCAACAAGCTTGCTGCTTCAAATTCAACATCCTCGTCATCTTCTCCTGCTTCTAGCTCTGGATTGCGCAGGGGAAGGAGTAGAAACAGACGTGCCCTTCCTCCATCTTCACCTTTGATTATTGAGTCTTCTTCATCTTGA 417 0.4532 MGPGEVRAVMEDLAAEYRGNAYNLITKNCNHFCKDACVRLTGNPIPSWVNRLARIGFLCNCVLPVTLNSTKVRHHRIEDKQCEGEKQALTSEPNKLAASNSTSSSSSPASSSGLRRGRSRNRRALPPSSPLIIESSSS. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca4g12076 138 PANTHER DESUMOYLATING ISOPEPTIDASE 3 110 IPR008580 GO:0008233
Seca4g12076 138 MobiDBLite consensus disorder prediction 82 138 - -
Seca4g12076 138 Pfam PPPDE putative peptidase domain 4 64 IPR008580 GO:0008233
Seca4g12076 138 MobiDBLite consensus disorder prediction 92 115 - -
Seca4g12076 138 Gene3D PPPDE domains 1 84 IPR042266 -
Seca4g12076 138 ProSiteProfiles PPPDE domain profile. 1 67 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca4g12076 Seca-Chr4 261667127 261669562 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca4g12076 K22763 - gmx:100796813 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca4g12076 4 261667127 261669562 Seca4g12076 4 261667127 261669562 ECH